SwiftSeal

SwiftSeal's Stars

• typst/typst

  A new markup-based typesetting system that is powerful and easy to learn.

  Language:Rust35.6k962.7k952

• fish-shell/fish-shell

  The user-friendly command line shell.

  Language:Rust26.4k2807.2k1.9k

• OpenGene/fastp

  An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

  Language:C++1.9k51522334

• bioconda/bioconda-recipes

  Conda recipes for the bioconda channel.

  Language:Shell1.6k971.9k3.3k

• rust-bio/rust-bio

  This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

  Language:Rust1.6k71198207

• YuLab-SMU/ggtree

  :christmas_tree:Visualization and annotation of phylogenetic trees

  Language:R84638505173

• chhylp123/hifiasm

  Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

  Language:C++5552967388

• gmarcais/Jellyfish

  A fast multi-threaded k-mer counter

  Language:C++47530183136

• marbl/verkko

  Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and Oxford Nanopore ultra-long reads.

  Language:Python3051828830

• isovic/racon

  Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr.214270.116 Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:

  Language:C++2732223449

• LaPreprint/typst

  Easily create beautiful preprints in Typst

  Language:Typst2294610

• huangnengCSU/compleasm

  A genome completeness evaluation tool based on miniprot

  Language:Python17953718

• wdecoster/chopper

  Language:Rust15373213

• TobyBaril/EarlGrey

  Earl Grey: A fully automated TE curation and annotation pipeline

  Language:Python143611920

• open2c/cooltools

  The tools for your .cool's

  Language:Jupyter Notebook1401330851

• zhangrengang/TEsorter

  TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes

  Language:Pep89075920

• arangrhie/merfin

  Evaluate variant calls and its combination with k-mer multiplicity

  Language:C645145

• Gaius-Augustus/TSEBRA

  TSEBRA: Transcript Selector for BRAKER

  Language:Python484425

• schmeing/gapless

  Gapless provides combined scaffolding, gap-closing and assembly correction with long reads

  Language:Python333184

• SwiftSeal/resistify

  Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightweight and easy to use.

  Language:Python262112

• CSU-KangHu/NeuralTE

  TE Classifier Using CNN

  Language:Python6210

• tncvasconcelos/mvh

  R package for assembling and organizing virtual herbaria

  Language:R3110