TimOliverMaier
Synthetic biology brought me to computational biology brought me to Bayesian statistics. PhD student at JGU Mainz
Johannes Gutenberg UniversitätMainz, Germany
Pinned Repositories
aeppl
Tools for an Aesara-based PPL.
aesara
Aesara is a Python library that allows one to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.
alphatims
An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.
arviz
Exploratory analysis of Bayesian models with Python
BiochemicalAlgorithms.jl
The Biochemical Algorithms Library in Julia
cml_dvc_case
dvc
🦉Data Version Control | Git for Data & Models | ML Experiments Management
example_cml
TimOliverMaier's Repositories
TimOliverMaier/aeppl
Tools for an Aesara-based PPL.
TimOliverMaier/aesara
Aesara is a Python library that allows one to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.
TimOliverMaier/alphatims
An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.
TimOliverMaier/arviz
Exploratory analysis of Bayesian models with Python
TimOliverMaier/BiochemicalAlgorithms.jl
The Biochemical Algorithms Library in Julia
TimOliverMaier/cml_dvc_case
TimOliverMaier/dvc
🦉Data Version Control | Git for Data & Models | ML Experiments Management
TimOliverMaier/example_cml
TimOliverMaier/ionmob
An open-source prediction framework for peptide ion collision cross section (CCS) values with python.
TimOliverMaier/machine-learning-algorithm-implemention
Implement algorithms with basic functions
TimOliverMaier/mcmc_runtime_comparison
Compares Stan, PyMC, and PyMC + JAX numpyro sampler on a model for tennis
TimOliverMaier/proteolizard-algorithm
prototype machine-learning solutions for high-throughput MS with ease
TimOliverMaier/proteolizard-data
a collection of tools and wrapper classes for timsTOF data access and processing
TimOliverMaier/proteolizard-vis
a collection of python classes and widgets for display of all aquisitions generated by timsTOF
TimOliverMaier/pymc
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Aesara
TimOliverMaier/pymc-examples
Examples of PyMC models, including a library of Jupyter notebooks.
TimOliverMaier/pymc-experimental
TimOliverMaier/pystoms
Analysis of precursor MS features using bayesian statistics.
TimOliverMaier/PyTestforDataScience_PyDataLA
Pytest for Data Science Beginners
TimOliverMaier/rustims_tm
A lightning fast hackable API for timsTOF data written in RUST