TommasoTarchi
Master student in Data Science at University of Trieste - Research intern at SISSA
Trieste, Italy
Pinned Repositories
Advanced_HPC-Final_assignments
Jacobi method for Laplace equation and linear algebra exercises, using CUDA, OpenACC and MPI Remote Memory Access
autoRNAseq
Automated pipeline for RNAseq data analysis using nextflow and singularity.
DNABERT_2-spec_versions
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome - Specify package versions
enc_chain
A study on the loss of data variability in (generative) variational autoencoders, with a focus on architectural modifications to mitigate the effect.
Foundations_of_HPC-FinalProject
Two HPC exercises: 1. Parallel implementation of Conway's Game of Life using MPI and OpenMP concurrently; 2. Scalability study on libraries for basic linear algebra operations.
My_UL_library
My personal implementation of several unsupervised learning algorithms.
NumericalAnalysis-FinalProject
Final assignment for the numerical methods exam: implementation of an image classifier based on ball-tree algorithm.
proglie
Comparison of multiple machine learning algorithms for leaf classification.
stocco
A new implementation of a well-known stochastic model for carcinogenesis, augmented with competition dynamics and spatial structuring.
Sympatric_speciation-BSc_thesis
A numerical study on the phenomenon of sympatric speciation in both sexual and asexual species, within a static habitat with intra-species competition.
TommasoTarchi's Repositories
TommasoTarchi/Foundations_of_HPC-FinalProject
Two HPC exercises: 1. Parallel implementation of Conway's Game of Life using MPI and OpenMP concurrently; 2. Scalability study on libraries for basic linear algebra operations.
TommasoTarchi/autoRNAseq
Automated pipeline for RNAseq data analysis using nextflow and singularity.
TommasoTarchi/Advanced_HPC-Final_assignments
Jacobi method for Laplace equation and linear algebra exercises, using CUDA, OpenACC and MPI Remote Memory Access
TommasoTarchi/DNABERT_2-spec_versions
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome - Specify package versions
TommasoTarchi/enc_chain
A study on the loss of data variability in (generative) variational autoencoders, with a focus on architectural modifications to mitigate the effect.
TommasoTarchi/My_UL_library
My personal implementation of several unsupervised learning algorithms.
TommasoTarchi/NumericalAnalysis-FinalProject
Final assignment for the numerical methods exam: implementation of an image classifier based on ball-tree algorithm.
TommasoTarchi/proglie
Comparison of multiple machine learning algorithms for leaf classification.
TommasoTarchi/stocco
A new implementation of a well-known stochastic model for carcinogenesis, augmented with competition dynamics and spatial structuring.
TommasoTarchi/Sympatric_speciation-BSc_thesis
A numerical study on the phenomenon of sympatric speciation in both sexual and asexual species, within a static habitat with intra-species competition.