Two-Way Model Package Updates/Bug Fixes

[zacadelman]

The twoway/reconfigure script is looking for a CCTM config file called cfg*. The name of this file in the new CMAQv5.2 release is now *.cfg.

Change line 3 for twoway/reconfigure to:
set cfg_file = ls -1 cmaq/*.cfg

[zacadelman]

Update the Build Instructions documentation to say that the user must set the variable FC to either ifort, pgi, or gfort before running the command twoway/assemble (8th bullet in the build instructions section)

[zacadelman]

Line 43 of twoway/reconfigure need to terminate the sed command by adding a "/" after the 132:

sed 's/-ffixed-form/-ffixed-form -ffixed-line-length-132/' \

[zacadelman]

Update twoway/reconfigure so that LIOAPI in configure.wrf is set to lib:

#if ($FC == ifort) then
#   echo "LIOAPI  = Linux2_x86_64ifort" >> __temp
#else if ($FC == pgi) then
#   echo "LIOAPI  = Linux2_x86_64pg" >> __temp
#else if ($FC == gfort) then
#   echo "LIOAPI  = Linux2_x86_64gfort" >> __temp
#endif
   echo "LIOAPI  = lib" >> __temp

[zacadelman]

Add a note to the documentation that if Gfortran is used to compile WRF-CMAQ, it must be newer than v5.0 (requirement of WRF3.8).

[zacadelman]

Change line 3 of twoway/misc/Makefile.twoway.part1 from

IOAPI_INC_PATH = $(IOAPI)/ioapi/fixed_src

to

IOAPI_INC_PATH = $(IOAPI)/include_files

[zacadelman]

Variable biogon is undefined in the script twoway_model_run_script

[dwongepa]

• The twoway/reconfigure script is looking for a CCTM config file called cfg*.

  has been addressed

• Update the Build Instructions documentation to say that the user must set the variable FC to either ifort, pgi, or gfort before running the command twoway/assemble (8th bullet in the build instructions section)

  FC is inherited from configure.wrf so user does not need to set it

• Line 43 of twoway/reconfigure need to terminate the sed command by adding a "/" after the 132

  has bee addressed

• Update twoway/reconfigure so that LIOAPI in configure.wrf is set to lib

  I think we should keep the traditional notation Linux2_x86_* where * is a specific compiler, e.g. 64ifort or 64pg

• Add a note to the documentation that if Gfortran is used to compile WRF-CMAQ, it must be newer than v5.0 (requirement of WRF3.8)

  agree

• Change line 3 of twoway/misc/Makefile.twoway.part1

  I think we should keep the traditional IOAPI path structure, i.e. IOAPI_INC_PATH = $(IOAPI)/ioapi/fixed_src

• Variable biogon is undefined in the script twoway_model_run_script

  That line should be replaced with

    if ( $CTM_BIOGEMIS == 'Y' ) then
  

  and it has been addressed