/NEMOSnakeMake

Testing out SnakeMake as a new tool for Benchtests

Primary LanguagePython

NEMOSnakeMake

SnakeMake is a workflow management system. Within NEMO, Makefiles is the currentmanagement tool used. Similair to Makefiles, Snakefiles is the specific file format used within SnakeMake platform.

SnakeMake Converter

There are minute details that make Snakefiles quite distinct from Makefiles. As such, I developed a Snakefile converter that converters Testfiles into Snakefiles directly. This was done using Python. The code is housed under formatter_v2.py. Multiple example Testfiles were tested to debug and gauge the codes effectiveness.