For simulations in https://doi.org/10.1101/810507 please use branch isp
- Create multiple plant structure
- Coupling with PiafMunch, and make carbon and water flow inside of the plant.
The most convenient way is to use google colab, which is a Linux virtual machine with jupyter notebook interface. You can click the link to follow the guide there, just to click some buttons and you will be able to create plants here is the link to use it.
Run CMake which configures the CPlantBox libraries by
cmake . && make
in the root folder, and run some Python tutorial examples (see tutorial/latex/PlantBox_RootSytem), e.g
cd tutorial/examples/python
python3 example1a.py
/modelparameter
Plant parameter files
/src
CPlantBox C++ codes
/test
Python tests for all CPlantBox classes
/tutorial
learn to use CPlantBox
Create the documentation by running doxygen in the folder $ doxygen doxy_config
The documentation will be located in the folder /doc
Simulation videos availabe in Youtube Channel https://www.youtube.com/channel/UCPK-pFfpK94jiamgwHxX32Q