ad3002
Genomics & AI researcher. Founder/CTO focusing on AI-assisted prod dev. AI-assisted software engineering. Autonomous agents. Science and tech through AI
aglabxCyprus
Pinned Repositories
quast
Genome assembly evaluation tool
Adriver-Loader
aindex
Perfect hash based Index for genomic data
CodeSnippets
Code snippets and examples
Cookiecutter
masters-course-2024-ai-assisted-programming
практические занятия, реальные проекты и техники разработки
PyBioSnippets
Snippets
PyChrDraw
Chromosome drawing for comparative genomics
PyExp
A small computational framework
trseeker
Trseeker
ad3002's Repositories
ad3002/masters-course-2024-ai-assisted-programming
практические занятия, реальные проекты и техники разработки
ad3002/EchoReaper
A small library for scraping websites using proxy
ad3002/Lyrebird
Raw reads based satellite DNA extraction pipeline
ad3002/make_jarvis
Homework: Build Your Own Jarvis
ad3002/minllama-assignment
ad3002/PyBioSnippets
Snippets
ad3002/PyExp
A small computational framework
ad3002/sophron
ad3002/trseeker
Trseeker
ad3002/aindex
Perfect hash based Index for genomic data
ad3002/AGB
Interactive visualization of assembly graphs
ad3002/bioconda-recipes
Conda recipes for the bioconda channel.
ad3002/BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes
ad3002/cactus
Official home of genome aligner based upon notion of Cactus graphs
ad3002/chromocheck
Detection for chromosomal abnormalities at the megabase level
ad3002/code2claude
A Python tool that consolidates code from a repository into a unified format for AI-assisted analysis and manipulation.
ad3002/EchoPapers
EchoPapers: Discover and analyze the impact of academic papers through citation tracking and advanced analytics
ad3002/edusummer2021
ad3002/EduTrack
EduTrack
ad3002/emphf
An efficient external-memory algorithm for the construction of minimal perfect hash functions
ad3002/gpt-biologist
ad3002/hallo-webui
Webui for Hallo: Hierarchical Audio-Driven Visual Synthesis for Portrait Image Animation
ad3002/nceu
NCeu (NCurses Email Usage)
ad3002/open-webui
User-friendly WebUI for LLMs (Formerly Ollama WebUI)
ad3002/RNA-Bloom
:hibiscus: reference-free transcriptome assembly for short and long reads
ad3002/TOGA
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or lost.
ad3002/utriobin
Trio binning kmers
ad3002/v16trim
ad3002/xspeakme
ad3002/zed
Code at the speed of thought – Zed is a high-performance, multiplayer code editor from the creators of Atom and Tree-sitter.