adrian-valente's Stars
OpenNMT/CTranslate2
Fast inference engine for Transformer models
SYSTRAN/faster-whisper
Faster Whisper transcription with CTranslate2
vsitzmann/awesome-implicit-representations
A curated list of resources on implicit neural representations.
jwkvam/celluloid
:movie_camera: Matplotlib animations made easy
google/flax
Flax is a neural network library for JAX that is designed for flexibility.
pandas-dev/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
state-spaces/s4
Structured state space sequence models
latex-ninja/simple-hipstercv
A more simple, lightweight and a little bit different version of the Hipster CV
NicolasZucchet/minimal-LRU
Non official implementation of the Linear Recurrent Unit (LRU, Orvieto et al. 2023)
google-research/long-range-arena
Long Range Arena for Benchmarking Efficient Transformers
scverse/anndata
Annotated data.
pytorch/vision
Datasets, Transforms and Models specific to Computer Vision
openvax/mhcflurry
Peptide-MHC I binding affinity prediction
catherinesyeh/attention-viz
Visualizing query-key interactions in language + vision transformers
vdumoulin/conv_arithmetic
A technical report on convolution arithmetic in the context of deep learning
scverse/scanpy
Single-cell analysis in Python. Scales to >1M cells.
arogozhnikov/einops
Flexible and powerful tensor operations for readable and reliable code (for pytorch, jax, TF and others)
shap/shap
A game theoretic approach to explain the output of any machine learning model.
scverse/scirpy
A scanpy extension to analyse single-cell TCR and BCR data.
Giskard-AI/giskard
🐢 Open-Source Evaluation & Testing for ML models & LLMs
owkin/PyDESeq2
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
thunlp/GNNPapers
Must-read papers on graph neural networks (GNN)
SchedMD/slurm
Slurm: A Highly Scalable Workload Manager
davidmnoriega/fast2phy
Convert aligned fasta format to interleaved phylip format
rcedgar/muscle
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
gpertea/gffread
GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
mlbendall/telescope
Quantification of transposable element expression using RNA-seq
mlbendall/telescope_annotation_db
Transposable element databases
lh3/seqtk
Toolkit for processing sequences in FASTA/Q formats
abetlen/llama-cpp-python
Python bindings for llama.cpp