aertslab/arboreto

GRNboost2 importance vs GENIE3 weights

jfouyang opened this issue · 4 comments

jfouyang commented

Hi, I would like to ask what is the difference between:
i) importance calculated from GRNboost2 and
ii) weights calculated from GENIE3

Are these values comparable in anyway?
Or can I scale the numbers so that they are comparable?

luoboqingcai81 commented

I have the same questions , and i also wonder how to use the GRNboost2 result into the SCENIC

gmoore5 commented

Hi I just downloaded this package and wondering this too. How do I evaluate important values?

divyanshusrivastava commented

Its 2022... Can someone please answer this now?
How exactly are the "importance" scores calculated in GRNBoost implementation ?

  • 👍1
mpiersonsmela commented

It's 2023, and I still have the same question.

  • 😄2