The goal of MicroLabR is to consolidate a range of useful and common calculations from molecular biology, virology, and microbiology all into a single package of functions and shiny apps. Over a number of years I’ve generated multiple formula based excel spreadsheets and standalone Shiny apps that have been passed around the lab group or with external colleagues, and I felt that having everything in one place would make life a bit easier and version control much simpler.
You can install the development version of MicroLabR from GitHub with:
# install.packages("devtools")
devtools::install_github("alegione/MicroLabR")- Make functions for midpoint assays (e.g. TCID50) and incorporate Shiny App
- Make function for Multiplicity of Infection
- Make function for cell splitting
- Make function for haemocytometer/cell counting
- Incorporate ‘Plater’ for reading in datasheets
- Incorporate current Shiny Suite into one package
- Host pages on local server
- Add package to zenodo