data/ - all raw data analysis/ - proteomics, rna-seq, and simulation analyses and plots src/ - R and python scripts for data pre-processing output/ - Intermediate outputs such as pre-processed data that are ready for analysis in Rmarkdown
data/ - all raw data analysis/ - proteomics, rna-seq, and simulation analyses and plots src/ - R and python scripts for data pre-processing output/ - Intermediate outputs such as pre-processed data that are ready for analysis in Rmarkdown