docker 环境下mkl无法找到
JankinTian opened this issue · 2 comments
错误描述如下：
-- The C compiler identification is GNU 7.5.0
-- The CXX compiler identification is GNU 7.5.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
CMake Error at /home/app/cmake/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
Could NOT find MKL (missing: MKL_LIBRARIES)
Call Stack (most recent call first):
/home/app/cmake/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:594 (_FPHSA_FAILURE_MESSAGE)
cmake/FindMKL.cmake:360 (find_package_handle_standard_args)
CMakeLists.txt:28 (find_package)
-- Configuring incomplete, errors occurred!
See also "/home/app/puck/build/CMakeFiles/CMakeOutput.log".
See also "/home/app/puck/build/CMakeFiles/CMakeError.log".
当我使用
find / -name mkl 时发现可以找到mkl
结果如下：
/opt/intel/oneapi/mkl
/opt/intel/oneapi/mkl/2023.2.0/lib/cmake/mkl
/opt/intel/oneapi/mkl/2023.2.0/modulefiles/mkl
/opt/intel/oneapi/mkl/2023.2.0/include/oneapi/mkl
/usr/include/boost/numeric/odeint/external/mkl
请问这个问题如何解决？
参考#5 (comment)
中的信息，在cmake后添加 -DMKL_LIBRARIES=/opt/intel/oneapi/mkl/latest/lib/*.so
但是在make时出现下面的问题，
make[2]: *** No rule to make target '/opt/intel/oneapi/mkl/latest/lib/*.so', needed by 'tools/build'. Stop.
make[2]: *** Waiting for unfinished jobs....
[ 90%] Building CXX object tools/CMakeFiles/build.dir/__/puck/tinker/tinker_index.cpp.o
CMakeFiles/Makefile2:354: recipe for target 'tools/CMakeFiles/build.dir/all' failed
make[1]: *** [tools/CMakeFiles/build.dir/all] Error 2
Makefile:135: recipe for target 'all' failed
make: *** [all] Error 2
请问如何解决？
https://github.com/baidu/puck/blob/main/ann-benchmarks/install/Dockerfile.puck_inmem
Different installation methods of the MKL library have different deployment paths. You can refer to this dockefile, and this installation method is not problematic.