bhanugandham
Bioinformatician at the Broad Institute of MIT and Harvard, leading GATK community support
Broad InstituteCambridge,MA
Pinned Repositories
annox
CompGenomics 2015 Genome Annotation
data-portal-content
Markdown, images, PDFs, and similar content for HCA Data Portal
gatk3-4-rnaseq-germline-snps-indels
Workflows for processing RNA data for germline short variant discovery with GATK (v3+v4) and related tools
skylab
Secondary analysis pipelines
gatk
Official code repository for GATK versions 4 and up
GATK-for-Microbes
GATK-For-Primates
GATK For Primates Best Practices Protocol
picard
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
gatk4-rnaseq-germline-snps-indels
Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools
The-Broad-Institute-Single-Cell-RNA-Seq-Data-Set
Visualize cancer genomes with FAIR single-cell RNA-seq data
bhanugandham's Repositories
bhanugandham/gatk3-4-rnaseq-germline-snps-indels
Workflows for processing RNA data for germline short variant discovery with GATK (v3+v4) and related tools
bhanugandham/annox
CompGenomics 2015 Genome Annotation
bhanugandham/data-portal-content
Markdown, images, PDFs, and similar content for HCA Data Portal
bhanugandham/skylab
Secondary analysis pipelines