TensorFlow 2.4.0 Raspi --> RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd

Question

TensorFlow 2.4.0 Raspi --> RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd

Opened this issue 3 years ago · 3 comments

I have succesfully installed tensorflow 2.4.0 in raspi 4 using the build provided.

I initially had numpy 1.19.5 but it gave this error. upgrading to numpy1.21 also gives campatibility error. Currently numpy installed is 1.19.2 but still I am getting the same error.

when I try to import tensorflow, I get the following error.
RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd

Can I know why this is happening?

Requirement Details:
Processing ./tensorflow-2.4.0-cp37-none-linux_armv7l.whl
Requirement already satisfied: protobuf>=3.9.2 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (3.17.3)
Requirement already satisfied: flatbuffers~=1.12.0 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (1.12)
Requirement already satisfied: wheel~=0.35 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (0.37.0)
Requirement already satisfied: keras-preprocessing~=1.1.2 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (1.1.2)
Requirement already satisfied: opt-einsum~=3.3.0 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (3.3.0)
Requirement already satisfied: grpcio~=1.32.0 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (1.32.0)
Requirement already satisfied: h5py~=2.10.0 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (2.10.0)
Requirement already satisfied: astunparse~=1.6.3 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (1.6.3)
Requirement already satisfied: typing-extensions~=3.7.4 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (3.7.4.3)
Requirement already satisfied: wrapt~=1.12.1 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (1.12.1)
Requirement already satisfied: google-pasta~=0.2 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (0.2.0)
Requirement already satisfied: numpy~=1.19.2 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (1.19.2)
Requirement already satisfied: six~=1.15.0 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (1.15.0)
Requirement already satisfied: termcolor~=1.1.0 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (1.1.0)
Requirement already satisfied: tensorflow-estimator<2.5.0,>=2.4.0rc0 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (2.4.0)
Requirement already satisfied: absl-py~=0.10 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (0.13.0)
Requirement already satisfied: tensorboard~=2.4 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (2.6.0)
Requirement already satisfied: gast==0.3.3 in ./tf24_env/lib/python3.7/site-packages (from tensorflow==2.4.0) (0.3.3)
Requirement already satisfied: werkzeug>=0.11.15 in ./tf24_env/lib/python3.7/site-packages (from tensorboard~=2.4->tensorflow==2.4.0) (2.0.1)
Requirement already satisfied: requests<3,>=2.21.0 in ./tf24_env/lib/python3.7/site-packages (from tensorboard~=2.4->tensorflow==2.4.0) (2.26.0)
Requirement already satisfied: markdown>=2.6.8 in ./tf24_env/lib/python3.7/site-packages (from tensorboard~=2.4->tensorflow==2.4.0) (3.3.4)
Requirement already satisfied: tensorboard-data-server<0.7.0,>=0.6.0 in ./tf24_env/lib/python3.7/site-packages (from tensorboard~=2.4->tensorflow==2.4.0) (0.6.1)
Requirement already satisfied: setuptools>=41.0.0 in ./tf24_env/lib/python3.7/site-packages (from tensorboard~=2.4->tensorflow==2.4.0) (58.0.2)
Requirement already satisfied: tensorboard-plugin-wit>=1.6.0 in ./tf24_env/lib/python3.7/site-packages (from tensorboard~=2.4->tensorflow==2.4.0) (1.8.0)
Requirement already satisfied: google-auth<2,>=1.6.3 in ./tf24_env/lib/python3.7/site-packages (from tensorboard~=2.4->tensorflow==2.4.0) (1.35.0)
Requirement already satisfied: google-auth-oauthlib<0.5,>=0.4.1 in ./tf24_env/lib/python3.7/site-packages (from tensorboard~=2.4->tensorflow==2.4.0) (0.4.6)
Requirement already satisfied: charset-normalizer~=2.0.0; python_version >= "3" in ./tf24_env/lib/python3.7/site-packages (from requests<3,>=2.21.0->tensorboard~=2.4->tensorflow==2.4.0) (2.0.4)
Requirement already satisfied: urllib3<1.27,>=1.21.1 in ./tf24_env/lib/python3.7/site-packages (from requests<3,>=2.21.0->tensorboard~=2.4->tensorflow==2.4.0) (1.26.6)
Requirement already satisfied: idna<4,>=2.5; python_version >= "3" in ./tf24_env/lib/python3.7/site-packages (from requests<3,>=2.21.0->tensorboard~=2.4->tensorflow==2.4.0) (3.2)
Requirement already satisfied: certifi>=2017.4.17 in ./tf24_env/lib/python3.7/site-packages (from requests<3,>=2.21.0->tensorboard~=2.4->tensorflow==2.4.0) (2021.5.30)
Requirement already satisfied: importlib-metadata; python_version < "3.8" in ./tf24_env/lib/python3.7/site-packages (from markdown>=2.6.8->tensorboard~=2.4->tensorflow==2.4.0) (4.8.1)
Requirement already satisfied: rsa<5,>=3.1.4; python_version >= "3.6" in ./tf24_env/lib/python3.7/site-packages (from google-auth<2,>=1.6.3->tensorboard~=2.4->tensorflow==2.4.0) (4.7.2)
Requirement already satisfied: pyasn1-modules>=0.2.1 in ./tf24_env/lib/python3.7/site-packages (from google-auth<2,>=1.6.3->tensorboard~=2.4->tensorflow==2.4.0) (0.2.8)
Requirement already satisfied: cachetools<5.0,>=2.0.0 in ./tf24_env/lib/python3.7/site-packages (from google-auth<2,>=1.6.3->tensorboard~=2.4->tensorflow==2.4.0) (4.2.2)
Requirement already satisfied: requests-oauthlib>=0.7.0 in ./tf24_env/lib/python3.7/site-packages (from google-auth-oauthlib<0.5,>=0.4.1->tensorboard~=2.4->tensorflow==2.4.0) (1.3.0)
Requirement already satisfied: zipp>=0.5 in ./tf24_env/lib/python3.7/site-packages (from importlib-metadata; python_version < "3.8"->markdown>=2.6.8->tensorboard~=2.4->tensorflow==2.4.0) (3.5.0)
Requirement already satisfied: pyasn1>=0.1.3 in ./tf24_env/lib/python3.7/site-packages (from rsa<5,>=3.1.4; python_version >= "3.6"->google-auth<2,>=1.6.3->tensorboard~=2.4->tensorflow==2.4.0) (0.4.8)
Requirement already satisfied: oauthlib>=3.0.0 in ./tf24_env/lib/python3.7/site-packages (from requests-oauthlib>=0.7.0->google-auth-oauthlib<0.5,>=0.4.1->tensorboard~=2.4->tensorflow==2.4.0) (3.1.1)
Installing collected packages: tensorflow
Successfully installed tensorflow-2.4.0

Answer 1 · 2022-02-19T08:00:50.000Z

I was facing same issue in raspberry pi 3. Actually the error is with pandas. Although tensorflow need numpy~=1.19.2 , but pandas is not compliable with it. So, I have upgraded (because downgrading is not) my numpy to latest version and all works fine!!!!.

    root@raspberrypi:/home/pi# python3
    Python 3.7.3 (default, Jan 22 2021, 20:04:44) 
    [GCC 8.3.0] on linux
    Type "help", "copyright", "credits" or "license" for more information.
    >>> import numpy as np 
    >>> np.__version__
    '1.21.5'
    >>> import pandas as pd
    >>> pd.__version__
    '1.3.5'
    >>> import tensorflow as tf
    >>> tf.__version__
    '2.4.0'
    >>> tf.keras.__version__
    '2.4.0'
    >>> tf.keras.layers
    <module 'tensorflow.keras.layers' from '/usr/local/lib/python3.7/dist-packages/tensorflow/keras/layers/__init__.py'>

Same issue here also - https://stackoverflow.com/questions/66060487/valueerror-numpy-ndarray-size-changed-may-indicate-binary-incompatibility-exp/71183166#71183166

Try it out!!!!!!!!!!!!!!
And this repository owner is useless! People are facing issues and he/she is sleeping .......

Answer 2 · 2022-02-19T17:24:26.000Z

I was facing same issue in raspberry pi 3. Actually the error is with pandas. Although tensorflow need numpy~=1.19.2 , but pandas is not compliable with it. So, I have upgraded (because downgrading is not) my numpy to latest version and all works fine!!!!.
    root@raspberrypi:/home/pi# python3
    Python 3.7.3 (default, Jan 22 2021, 20:04:44) 
    [GCC 8.3.0] on linux
    Type "help", "copyright", "credits" or "license" for more information.
    >>> import numpy as np 
    >>> np.__version__
    '1.21.5'
    >>> import pandas as pd
    >>> pd.__version__
    '1.3.5'
    >>> import tensorflow as tf
    >>> tf.__version__
    '2.4.0'
    >>> tf.keras.__version__
    '2.4.0'
    >>> tf.keras.layers
    <module 'tensorflow.keras.layers' from '/usr/local/lib/python3.7/dist-packages/tensorflow/keras/layers/__init__.py'>
Same issue here also - https://stackoverflow.com/questions/66060487/valueerror-numpy-ndarray-size-changed-may-indicate-binary-incompatibility-exp/71183166#71183166

Try it out!!!!!!!!!!!!!! And this repository owner is useless! People are facing issues and he/she is sleeping .......

Hey @MegaCreater, thanks for digging into this and posting your fix.

I primarily use C++/Rust for embedded development lately (not Python), and I'm heads down on building PrintNanny. This is a community-maintained project - Google and the TensorFlow team do not pay me to provide support.

Contributions are welcome through. Here's the build script I used to create the binaries in the README.
https://github.com/bitsy-ai/tensorflow-arm-bin/blob/main/scripts/build_raspberry_pi.sh

Answer 3 · 2022-05-31T19:26:50.000Z

@leigh-johnson Thanks for your support and work.