Web app error

[cgregg1227]

Hi Cecilia!

I have been having the same issue described in the Web app error #8 issue conversation, but was having trouble generating a shame abundance table with all of KEGG metabolites using the KEGGREST R package. If possible, would you be able to send me the older version described in the Web app error #8 issue conversation?

Thank you for your time,
Collin

[cnoecker]

Hi Collin, thanks for following up. To be clear, what I can share is a metabolic network table based on an older version of KEGG, which you could then use to generate CMP scores (or you could extract all of the metabolite IDs and make a sham metabolite abundance table as others have done). Could you share your email address?

[cgregg1227]

Hi Cecilia,

That would be great! Thank you so much for your help with this. My email is mgcollin19@vt.edu

Thanks again,
Collin