boxiangliu

boxiangliu's Stars

• pytorch/pytorch

  Tensors and Dynamic neural networks in Python with strong GPU acceleration

  Language:Python84.6k1.7k46.9k22.8k

• sebastianruder/NLP-progress

  Repository to track the progress in Natural Language Processing (NLP), including the datasets and the current state-of-the-art for the most common NLP tasks.

  Language:Python22.7k1.3k1013.6k

• google-deepmind/deepmind-research

  This repository contains implementations and illustrative code to accompany DeepMind publications

  Language:Jupyter Notebook13.3k3253242.6k

• poloclub/cnn-explainer

  Learning Convolutional Neural Networks with Interactive Visualization.

  Language:JavaScript8.2k165481.2k

• tensorlayer/TensorLayer

  Deep Learning and Reinforcement Learning Library for Scientists and Engineers

  Language:Python7.3k4594671.6k

• deepchem/deepchem

  Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

  Language:Python5.6k1431.7k1.7k

• bentrevett/pytorch-seq2seq

  Tutorials on implementing a few sequence-to-sequence (seq2seq) models with PyTorch and TorchText.

  Language:Jupyter Notebook5.4k651931.3k

• eseckel/ai-for-grant-writing

  A curated list of resources for using LLMs to develop more competitive grant applications.

  Language:Python2.9k210379

• dustinvtran/latex-templates

  A collection of LaTeX templates used for research, courses, and miscellanea.

  Language:TeX747202151

• ctwise/alfred-workflows

  Language:Ruby476242249

• XuezheMax/NeuroNLP2

  Deep neural models for core NLP tasks (Pytorch version)

  Language:Python441214489

• JakeLin/Todo

  A todo list app written in Swift

  Language:Swift27617897

• mpa139/allanlab

  Allan Lab website

  Language:SCSS274671.2k

• NCI-GDC/gdc-client

  GDC Data Transfer Tool

  Language:Python14639041

• freeseek/gtc2vcf

  Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF

  Language:C14297724

• greenelab/covid19-review

  A collaborative review of the emerging COVID-19 literature. Join the chat here:

  Language:TeX1161346081

• boxiangliu/locuscomparer

  LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.

  Language:R10662918

• bmvdgeijn/WASP

  WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery

  Language:Python1031110051

• pycogent/pycogent

  PyCogent: Official repository for software and unit tests

  Language:Python89198052

• tkzeng/Pangolin

  Pangolin is a deep-learning method for predicting splice site strengths.

  Language:Python6642233

• jrs95/hyprcoloc

  Hypothesis Prioritisation in multi-trait Colocalization

  Language:R4733112

• madhadron/bein

  Miniature LIMS and workflow manager for bioinformatics

  Language:Python417187

• xqwen/integrative

  Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization

  Language:Perl241107

• boxiangliu/locuscompare

  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.

  Language:R215106

• davidaknowles/eagle

  An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified from RNA-seq

  Language:R21626

• mikegloudemans/colocalization-ensemble-pipeline

  Colocalization analysis of GWAS and eQTL loci in brain tissues.

  Language:Python77180

• mikegloudemans/post-coloc-toolkit

  Tools for exploring GWAS / QTL colocalization results

  Language:Python6201

• znculee/dotfiles

  Personal settings and templates

  Language:Vim Script6200

• boxiangliu/ANTseq

  Cheap Ancestry Determination with Targeted Sequencing

  Language:R2300