broadinstitute/CellBender

"Trying to use CUDA, " \ AssertionError: Trying to use CUDA, but CUDA is not available.

shnsk1995 opened this issue · 0 comments

I am trying to run Cell Bender using CUDA. While the remove-background module runs successfully without the --cuda argument, I get the following error when I use the --cuda argument.

AssertionError: Trying to use CUDA, but CUDA is not available.

I am using a research cluster and have loaded Cudatoolkit version 12.2. I have then followed the documentation to install the Cell Bender from source in a virtual conda environment with python3.7. Can someone please suggest some possible solutions?