pip install failure (firecloud-0.16.35, firecloud-0.16.33, and likely others)
Closed this issue · 1 comments
aofarrel commented
OS: Jammy Ubuntu Docker image running atop Mac 10.15.7 host
Python: 3.11
× Preparing metadata (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [73 lines of output]
running dist_info
creating /tmp/pip-modern-metadata-kxtg467e/lazy_object_proxy.egg-info
writing /tmp/pip-modern-metadata-kxtg467e/lazy_object_proxy.egg-info/PKG-INFO
writing dependency_links to /tmp/pip-modern-metadata-kxtg467e/lazy_object_proxy.egg-info/dependency_links.txt
writing top-level names to /tmp/pip-modern-metadata-kxtg467e/lazy_object_proxy.egg-info/top_level.txt
writing manifest file '/tmp/pip-modern-metadata-kxtg467e/lazy_object_proxy.egg-info/SOURCES.txt'
reading manifest file '/tmp/pip-modern-metadata-kxtg467e/lazy_object_proxy.egg-info/SOURCES.txt'
adding license file 'LICENSE'
adding license file 'AUTHORS.rst'
writing manifest file '/tmp/pip-modern-metadata-kxtg467e/lazy_object_proxy.egg-info/SOURCES.txt'
creating '/tmp/pip-modern-metadata-kxtg467e/lazy_object_proxy-1.8.0.dist-info'
Traceback (most recent call last):
File "/usr/local/lib/python3.11/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 351, in <module>
main()
File "/usr/local/lib/python3.11/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 333, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 152, in prepare_metadata_for_build_wheel
return hook(metadata_directory, config_settings)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel
self.run_setup()
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup
self).run_setup(setup_script=setup_script)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup
exec(code, locals())
File "<string>", line 72, in <module>
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/__init__.py", line 87, in setup
return distutils.core.setup(**attrs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup
return run_commands(dist)
^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands
dist.run_commands()
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands
self.run_command(cmd)
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/dist.py", line 1208, in run_command
super().run_command(command)
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
cmd_obj.run()
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 101, in run
bdist_wheel = self.get_finalized_command('bdist_wheel')
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 304, in get_finalized_command
cmd_obj = self.distribution.get_command_obj(command, create)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 860, in get_command_obj
klass = self.get_command_class(command)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/setuptools/dist.py", line 953, in get_command_class
self.cmdclass[command] = cmdclass = ep.load()
^^^^^^^^^
File "/usr/local/lib/python3.11/importlib/metadata/__init__.py", line 202, in load
module = import_module(match.group('module'))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/importlib/__init__.py", line 126, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "<frozen importlib._bootstrap>", line 1206, in _gcd_import
File "<frozen importlib._bootstrap>", line 1178, in _find_and_load
File "<frozen importlib._bootstrap>", line 1149, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 690, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 940, in exec_module
File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/wheel/bdist_wheel.py", line 28, in <module>
from .macosx_libfile import calculate_macosx_platform_tag
File "/tmp/pip-build-env-_u7jp9m3/overlay/lib/python3.11/site-packages/wheel/macosx_libfile.py", line 43, in <module>
import ctypes
File "/usr/local/lib/python3.11/ctypes/__init__.py", line 8, in <module>
from _ctypes import Union, Structure, Array
ModuleNotFoundError: No module named '_ctypes'
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed
× Encountered error while generating package metadata.
╰─> See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.
aofarrel commented
Turns out this was an issue on my end. My Docker image compiles Python3 manually, and I did not have libffi-dev installed. Remaking the image after adding that dependency and remaking Python allowed for this package to install successfully.