broadinstitute/seqr-loading-pipelines

Clarify invalid allele validation.

Closed this issue · 1 comments

bpblanken commented
  • If all invalid alleles are NON_REF, make the error message about the "VCF actually being a gVCF, which is unsupported".
  • Else only include the first 10 invalid alleles in the output.
lynnpais commented

Done