callaband

DVM/PhD. Currently a post-doc with Rob Knight's Lab at UCSD.

@knightlab-analyses San Diego, CA

Pinned Repositories

gemelli
Gemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TEMPTED), and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets.
Language:Python73 7 6618
metagenomics_pooling_notebook
Jupyter notebooks to assist with sample processing
Language:Python8 10 7816
2023-05-11-callaband
practice for workshop
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Bile_Acid_Review_2022
Figure2 Background Analysis
Language:Jupyter Notebook0 1 00
callaband.github.io
Celeste Allaband's Academic Website
Language:JavaScript00
metagenomics_pooling_notebook
Jupyter notebooks to assist with sample processing
Language:Jupyter Notebook00
q2-katharoseq
add info for greengenes2
Language:Python00
baltic
baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).
Language:Python93 10 2629
circadian-ihc
Circadian Experiments - Microbiome, Metabolome
Language:Jupyter Notebook2 5 00
q2-SCRuB
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callaband/2023-05-11-callaband
practice for workshop
Language:HTML00
callaband/Bile_Acid_Review_2022
Figure2 Background Analysis
Language:Jupyter Notebook0 1 00
callaband/callaband.github.io
Celeste Allaband's Academic Website
Language:JavaScript00
callaband/metagenomics_pooling_notebook
Jupyter notebooks to assist with sample processing
Language:Jupyter Notebook00
callaband/q2-katharoseq
add info for greengenes2
Language:Python00