Issue with MutationOccurrenceVisualization notebook
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Albaburi commented
When I run JupyterLab's notebook MutationOccurrenceVisualization I get this error:
ValueError Traceback (most recent call last)
<ipython-input-19-5431d1030684> in <module>
5 print(sample, amplicon, amplicon_data)
6
----> 7 max_entry = max(amplicon_data['sites']) # corresponds to all mutations
8
9 if max_entry not in amplicon_data['muts']:
ValueError: max() arg is an empty sequence
I don´t kwon how to solve this isseu.
This is my data, which I have obtained after running V-pipe and getting the cooc-test.json file.