Pinned Repositories
DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
GeorgiScripts
idr
IDR
MAnorm
A robust model for quantitative comparison of ChIP-Seq data sets.
MDnotes
Links to all data science, genomics, and other notes
mgatk
mgatk: mitochondrial genome analysis toolkit
scATAC-seq_notes
scATAC-seq data analysis tools and papers
scRNA-seq_notes
A list of scRNA-seq analysis tools
single-cell-pseudotime
An overview of algorithms for estimating pseudotime in single-cell RNA-seq data
chaiepi's Repositories
chaiepi/single-cell-pseudotime
An overview of algorithms for estimating pseudotime in single-cell RNA-seq data
chaiepi/scRNA-seq_notes
A list of scRNA-seq analysis tools
chaiepi/sinto
Tools for single-cell data processing
chaiepi/MDnotes
Links to all data science, genomics, and other notes
chaiepi/DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
chaiepi/fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
chaiepi/mgatk
mgatk: mitochondrial genome analysis toolkit
chaiepi/GeorgiScripts
chaiepi/scATAC-seq_notes
scATAC-seq data analysis tools and papers
chaiepi/idr
IDR
chaiepi/SoupX
R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
chaiepi/MAnorm
A robust model for quantitative comparison of ChIP-Seq data sets.