Include short data validity comment in activity endpoint
Closed this issue · 4 comments
Using the DATA_VALIDITY_LOOKUP table:
select concat(concat(concat(concat('"',d.DESCRIPTION ),'": "'), d.DATA_VALIDITY_COMMENT), '",') from DATA_VALIDITY_LOOKUP d;
This is now implemented for example: https://www.ebi.ac.uk/chembl/api/data/activity/32190.json. Field name is "activity_comment".
activity comment and data validity comment are different, the short version of the comment is already present in the activity table.
select distinct(act.DATA_VALIDITY_COMMENT) from activities act where act.DATA_VALIDITY_COMMENT IS NOT NULL
However, the web service exposes the long one:
https://www.ebi.ac.uk/chembl/api/data/activity/4773286.json
Probably from:
select d.DESCRIPTION, d.DATA_VALIDITY_COMMENT from DATA_VALIDITY_LOOKUP d;
it should expose both:
probably as:
{
. . .
"data_validity_comment": "<SHORT FORM>",
"data_validity_comment_description": "<LONG FORM>",
. . .
}
{
. . .
"data_validity_comment": "Outside typical range",
"data_validity_comment_description": "Values for this activity type are unusually large/small, so may not be accurate",
. . .
}
Can you please check now?
it looks good thanks!