chemosim-lab/ProLIF

Ignoring interactions that occur below a certain threshold of the simulation frame in barcode plots

elizagg opened this issue · 1 comments

Hello. Currently, the barcode plots that I am making contain interactions that only occur in one frame of the simulation, which causes the y-axis to be congested. However, I was wondering if there is a way to apply a threshold to either the interaction fingerprint or the barcode plot to make it so that only interactions that occur above a certain percent of simulation frames are plotted. Thank you!

Hi,

See issue #184 for an example code snippet on how to do that

Feel free to reopen this issue if you have any related question.