License
Closed this issue · 9 comments
Following the guidance of this Victoria Stodden paper, we should add licenses for the coda and data made available in this repo:
- All code should be made available under the permissive OSI-approved MIT License
- All data should be made available under the CC BY 4.0 License - legal code
@steven-albanese : Could you add the formatted text versions of this to the repo and update the README.md to reflect these licenses?
@jchodera I've added the MIT license, but I'm not sure how to handle the license for the data. We also haven't yet made the data for the eLife paper available yet
We need a data license in the repo for people to use the processed data that we provide in this repo. (And we should try to include the processed data here that we have been plotting if it's small enough---under 1 GB, say.)
I'd add the following text to README:
* The software in this repository is made available under the [MIT License](https://opensource.org/licenses/MIT) - a copy of this license is provided as `SOFTWARE_LICENSE`
* The data in this repository is made available under the [CC BY 4.0 License](https://creativecommons.org/licenses/by/4.0/) - a copy of this license is provided as `DATA_LICENSE`
You can grab a plaintext copy of the DATA_LICENSE here.
We should also start uploading the nosolvent FAH data we used to OSF. Is there a README somewhere with all the FAH project numbers in it that I can compile and start uploading?
The processed data for the phosphorylation paper is uploaded here for the AMBER data and here for the spin probe CHARMM data.
Great---that's already taken care of then.
I can add the CHARMM WT data if you think we should. I haven't so far because it isn't used in the paper
We don't need to add it if it's not in the paper.
I'll start uploading the trajectory data to OSF once you compile project numbers, but I think we're good to go once these PRs are merged.
Ok! I'm just compiling the README now. I'll add it to the phosphorylation-paper directory in a moment
I've added the project list here: https://github.com/choderalab/AurA-materials/tree/master/phosphorylation-paper
I've only included the projects and RUNS that were used in the paper (i.e., I've filtered out all of the mutant RUNS so we didn't look at those).
Thanks! I'll stage and upload those!
I think this has been resolved, so I'll close this now. I am going to open a separate issue for the OSF upload