Add quiet=FALSE to coloc.abf()
oborisov opened this issue · 0 comments
oborisov commented
combine.abf() function has a useful "quiet=FALSE" parameter. Unfortunately, It is not possible to pass this parameter when calling coloc.abf() (which internally calls combine.abf).
Suggestion:
Lines 324 to 325 in 0afe607
coloc.abf <- function(dataset1, dataset2, MAF=NULL,
p1=1e-4, p2=1e-4, p12=1e-5, quiet=FALSE) {
...
Line 353 in 0afe607
pp.abf <- combine.abf(merged.df$lABF.df1, merged.df$lABF.df2, p1, p2, p12, quiet)