Code and data example for using the sample barcode UMI count matrix as input (We want to try the tool for cell hashing data)
xhongyi opened this issue · 2 comments
xhongyi commented
Hi,
MULTI-seq looks very cool!
Could you please supply the example input data files that is included in the manual?
Currently it is very difficult for a non-R programmer to use the tool.
It is mensioned that MULTI-seq is capable of taking UMI matrix as input. Could you please provide a code and data example for this feature?
xhongyi commented
The data on the Gene Expression Omnibus are mostly in mtx format. We are a bit confuse on how to use them.
Looking forward to your reply!
xhongyi commented
I think I figured out how to use it.
It may still be useful to attach an example csv file to the github for illustration purposes.