claradepaolis
I work on machine learning, with particular interest in structured data: genetic sequences, time series, graphs and networks
Pinned Repositories
bi-est
Estimating Bias in semi-supervised learning
bi-est-python
Estimate bias in semisupervised data via nested Expectation Maximization
CAFA-evaluator
A Python Tool for Benchmarking Ontological Classification Methods
CAFA2_matlab22
Matlab Evaluation codes for the 2nd CAFA experiment
code2inv
Code2Inv: Learning Loop Invariants for Program Verification
D2DRNN
GOdatasets
Process Gene Ontology annotation data
InformationAccretion
Compute Information Accretion of ontology terms from a dataset
pytorch-install-test
Scripts to test installation of GPU-enabled Pytorch and tensorboard
PytorchNN_templates
Simple templates for training neural networks in Pytorch
claradepaolis's Repositories
claradepaolis/InformationAccretion
Compute Information Accretion of ontology terms from a dataset
claradepaolis/bi-est-python
Estimate bias in semisupervised data via nested Expectation Maximization
claradepaolis/bi-est
Estimating Bias in semi-supervised learning
claradepaolis/CAFA-evaluator
A Python Tool for Benchmarking Ontological Classification Methods
claradepaolis/CAFA2_matlab22
Matlab Evaluation codes for the 2nd CAFA experiment
claradepaolis/code2inv
Code2Inv: Learning Loop Invariants for Program Verification
claradepaolis/D2DRNN
claradepaolis/EvolveGCN
Code for EvolveGCN: Evolving Graph Convolutional Networks for Dynamic Graphs
claradepaolis/GOdatasets
Process Gene Ontology annotation data
claradepaolis/neurosat
NeuroSAT: Learning a SAT Solver from Single-Bit Supervision
claradepaolis/pytorch-install-test
Scripts to test installation of GPU-enabled Pytorch and tensorboard
claradepaolis/PytorchNN_templates
Simple templates for training neural networks in Pytorch
claradepaolis/pseqsid
Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.
claradepaolis/pytorch_geometric
Geometric Deep Learning Extension Library for PyTorch
claradepaolis/tf
A custom version of the ros/tf package, with small API changes. Used by some the our code, until we migrate to TF2.
claradepaolis/vminspect
Tools for inspecting VM disk images
claradepaolis/YelpRecSys
Data Mining final project: Recommender System for Yelp dataset