'Plotter' object has no attribute 'plot_Rt_types'
lauramiron opened this issue · 1 comments
lauramiron commented
It looks like the function plotter.plot_Rt_types() was removed by commit 88328a4 which adds functions for computing the daily Rts. There are still several places in sim/experiments.ipynb that call plotter.plot_Rt_types(). Is the new function plotter.plot_daily_rts() intended to replace plotter.plot_Rt_types()?
trouleau commented
Hello,
That is indeed a bug introduced in this commit. We updated the way effective reproduction numbers are computed to report these estimates on the updated version of our paper but I missed them in sim/experiments.ipynb. Thank you for pointing this out and apologies. This should now be fixed in 89b7b5d.