CPernet

brain imaging, data science and code :-)

Copenhagen University HospitalCopenhagen, DK

Pinned Repositories

brain_colours
colour map for brain imaging
Language:MATLAB18 3 26
EEGPreprocessing_Not_so_Basic
OHBM 2020 Educational
Language:MATLAB2 3 03
matlab-bayesian-estimation
Matlab Toolbox for Bayesian Estimation
Language:MATLAB2 2 01
open-brain-consent
Making neuroimaging open from the grounds (consent form) and up (tools)
Language:Shell2 4 33
ReproducibleQuantitativeDataScience
Post graduate course
Language:Jupyter Notebook13 4 49
Robust-Correlations
Robust Correlation Toolbox (a Matlab library)
Language:MATLAB11 5 1117
Robust_Statistical_Toolbox
Robust_Statistical_Toolbox
Language:MATLAB21 5 016
spmrt
SPM reliability toolbox: a series of matlab functions for reliability that work with SPM
Language:MATLAB7 6 21
spmup
SPM tools to get the best of mass univariate analyses
Language:MATLAB40 7 2810

CPernet's Repositories

CPernet/spmup
SPM tools to get the best of mass univariate analyses
Language:MATLAB40 7 2810
CPernet/Robust_Statistical_Toolbox
Robust_Statistical_Toolbox
Language:MATLAB21 5 016
CPernet/ReproducibleQuantitativeDataScience
Post graduate course
Language:Jupyter Notebook13 4 49
CPernet/Robust-Correlations
Robust Correlation Toolbox (a Matlab library)
Language:MATLAB11 5 1117
CPernet/MRI_FaceData_Wakeman-Henson
Various data analyses illustrated using public MRI data
Language:MATLAB1 2 0
CPernet/stat_rethinking_2023
Statistical Rethinking Course for Jan-Mar 2023
Language:R1 0 0
CPernet/SPM_multimodal_segmentation
analysis of the multispectral segmentation
Language:MATLAB0 2 101
CPernet/bids-brain_tumours
template specification for brain tumour imaging using BIDS
3 0
CPernet/bids-examples
A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
Language:MATLAB0 0
CPernet/bids-extensions
BIDS Extension Proposal Docs
0 0
CPernet/bids-matlab
MATLAB / Octave tools for BIDS datasets
Language:MATLAB1 1
CPernet/bids-specification
Brain Imaging Data Structure (BIDS) Specification
Language:Python0 0
CPernet/bids-starter-kit
Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets
Language:MATLAB0 0
CPernet/bids-website
Website for the Brain Imaging Data Structure standard.
Language:HTML0 0
CPernet/book
Sources for the DataLad handbook
Language:Python1 0
CPernet/CPernet.github.io
personal website: https://cpernet.github.io/
Language:HTML2 0
CPernet/fs-docker
Dockerfiles for FreeSurfer
Language:Makefile0 0
CPernet/git-workshop
Repository accompanying the workshop "Collaborative version control with Git/Github"
Language:Python0 55
CPernet/heart_failure
1 01
CPernet/meta_meditation
raw metadata files, scripts and derived files for 'Mindfulness related changes in grey matter: A Systematic Review and Meta-analysis'
Language:R2 0
CPernet/metaprivBIDS
assessing privacy of tabular metadata (with some BIDS bonuses like reading the json dictionary file)
Language:Python1
CPernet/mffmatlabio
MFF Matlab file importer and exporter
Language:MATLAB0 0
CPernet/MINDy
The up-to-date code for Mesoscale Individualized NeuroDynamic modeling and filtering
Language:MATLAB0 0
CPernet/mml-book.github.io
Companion webpage to the book "Mathematics For Machine Learning"
Language:Jupyter Notebook0 0
CPernet/MOxUnit
An xUnit framework for Matlab and GNU Octave
Language:MATLAB1 0
CPernet/OpenNeuroCount
simple script to analyze datasets count from OpenNeuro
Language:MATLAB2 0
CPernet/Quicksheets
various cheatsheets for different coding languages
Language:Shell1 03
CPernet/spm
SPM (Statistical Parametric Mapping)
Language:MATLAB0 0
CPernet/spm12
Public Releases of SPM12 - see https://github.com/spm/spm for the Development Version
Language:MATLAB0 0
CPernet/website
This contains the content hosted on the FieldTrip website
Language:SCSS0 0