curso-r/treesnip

lightgbm no longer works

Closed this issue · 2 comments

Hi,
Unfortunately, lightgbm stopped working on my machine.
I tried to run the code of your vignette working-with-lightgbm-catboost.Rmd and the call to fit_resamples raised a fatal error and the R session crashed without any further information.
The catboost example run fine.
Please find attached my session info.

Thanks

package * version date lib source AmesHousing 0.0.4 2020-06-23 [1] CRAN (R 4.0.1) assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.0.0) backports 1.2.1 2020-12-09 [1] CRAN (R 4.0.3) bitops 1.0-6 2013-08-17 [1] CRAN (R 4.0.0) boot 1.3-27 2021-02-12 [2] CRAN (R 4.0.4) broom * 0.7.5 2021-02-19 [1] CRAN (R 4.0.4) cachem 1.0.4 2021-02-13 [1] CRAN (R 4.0.3) callr 3.6.0 2021-03-28 [1] CRAN (R 4.0.4) caTools 1.18.2 2021-03-28 [1] CRAN (R 4.0.4) class 7.3-18 2021-01-24 [2] CRAN (R 4.0.4) cli 2.3.1 2021-02-23 [1] CRAN (R 4.0.4) codetools 0.2-18 2020-11-04 [2] CRAN (R 4.0.4) colorspace 2.0-0 2020-11-11 [1] CRAN (R 4.0.3) corrr 0.4.3 2020-11-24 [1] CRAN (R 4.0.3) crayon 1.4.1 2021-02-08 [1] CRAN (R 4.0.3) DBI 1.1.1 2021-01-15 [1] CRAN (R 4.0.3) debugme 1.1.0 2017-10-22 [1] CRAN (R 4.0.0) desc 1.3.0 2021-03-05 [1] CRAN (R 4.0.4) descriptr 0.5.2 2020-12-09 [1] CRAN (R 4.0.3) DescTools 0.99.40 2021-02-03 [1] CRAN (R 4.0.3) devtools 2.3.2 2020-09-18 [1] CRAN (R 4.0.2) dials * 0.0.9 2020-09-16 [1] CRAN (R 4.0.2) DiceDesign 1.9 2021-02-13 [1] CRAN (R 4.0.3) digest 0.6.27 2020-10-24 [1] CRAN (R 4.0.3) dplyr * 1.0.5 2021-03-05 [1] CRAN (R 4.0.4) e1071 1.7-6 2021-03-18 [1] CRAN (R 4.0.4) ellipsis 0.3.1 2020-05-15 [1] CRAN (R 4.0.0) Exact 2.1 2020-10-02 [1] CRAN (R 4.0.2) expm 0.999-6 2021-01-13 [1] CRAN (R 4.0.3) extrafont 0.17 2014-12-08 [1] CRAN (R 4.0.0) extrafontdb 1.0 2012-06-11 [1] CRAN (R 4.0.0) fansi 0.4.2 2021-01-15 [1] CRAN (R 4.0.3) fastmap 1.1.0 2021-01-25 [1] CRAN (R 4.0.3) foreach 1.5.1 2020-10-15 [1] CRAN (R 4.0.3) fs 1.5.0 2020-07-31 [1] CRAN (R 4.0.2) furrr 0.2.2 2021-01-29 [1] CRAN (R 4.0.3) future 1.21.0 2020-12-10 [1] CRAN (R 4.0.3) generics 0.1.0 2020-10-31 [1] CRAN (R 4.0.3) ggplot2 * 3.3.3 2020-12-30 [1] CRAN (R 4.0.3) ggpmisc 0.3.9 2021-04-04 [1] CRAN (R 4.0.4) gld 2.6.2 2020-01-08 [1] CRAN (R 4.0.2) glmnet 4.1-1 2021-02-21 [1] CRAN (R 4.0.4) globals 0.14.0 2020-11-22 [1] CRAN (R 4.0.3) glue 1.4.2 2020-08-27 [1] CRAN (R 4.0.2) gower 0.2.2 2020-06-23 [1] CRAN (R 4.0.1) GPfit 1.0-8 2019-02-08 [1] CRAN (R 4.0.0) gtable 0.3.0 2019-03-25 [1] CRAN (R 4.0.0) infer * 0.5.4 2021-01-13 [1] CRAN (R 4.0.3) ipred 0.9-11 2021-03-12 [1] CRAN (R 4.0.4) iterators 1.0.13 2020-10-15 [1] CRAN (R 4.0.3) janitor 2.1.0 2021-01-05 [1] CRAN (R 4.0.3) lattice 0.20-41 2020-04-02 [2] CRAN (R 4.0.4) lava 1.6.9 2021-03-11 [1] CRAN (R 4.0.4) lhs 1.1.1 2020-10-05 [1] CRAN (R 4.0.2) lifecycle 1.0.0 2021-02-15 [1] CRAN (R 4.0.3) lime 0.5.2 2021-02-24 [1] CRAN (R 4.0.4) listenv 0.8.0 2019-12-05 [1] CRAN (R 4.0.0) lmom 2.8 2019-03-12 [1] CRAN (R 4.0.0) lubridate 1.7.10 2021-02-26 [1] CRAN (R 4.0.4) magrittr 2.0.1 2020-11-17 [1] CRAN (R 4.0.3) MASS 7.3-53.1 2021-02-12 [1] CRAN (R 4.0.3) Matrix 1.3-2 2021-01-06 [2] CRAN (R 4.0.4) memoise 2.0.0 2021-01-26 [1] CRAN (R 4.0.3) modeldata * 0.1.0 2020-10-22 [1] CRAN (R 4.0.3) munsell 0.5.0 2018-06-12 [1] CRAN (R 4.0.0) mvtnorm 1.1-1 2020-06-09 [1] CRAN (R 4.0.0) nnet 7.3-15 2021-01-24 [2] CRAN (R 4.0.4) pacman 0.5.1 2019-03-11 [1] CRAN (R 4.0.0) parallelly 1.24.0 2021-03-14 [1] CRAN (R 4.0.4) parsnip * 0.1.5 2021-01-19 [1] CRAN (R 4.0.3) pillar 1.5.1 2021-03-05 [1] CRAN (R 4.0.4) pkgbuild 1.2.0 2020-12-15 [1] CRAN (R 4.0.3) pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.0.0) pkgload 1.2.0 2021-02-23 [1] CRAN (R 4.0.4) plyr 1.8.6 2020-03-03 [1] CRAN (R 4.0.0) prettyunits 1.1.1 2020-01-24 [1] CRAN (R 4.0.0) pROC 1.17.0.1 2021-01-13 [1] CRAN (R 4.0.3) processx 3.5.1 2021-04-04 [1] CRAN (R 4.0.4) prodlim 2019.11.13 2019-11-17 [1] CRAN (R 4.0.0) proxy 0.4-25 2021-03-05 [1] CRAN (R 4.0.4) ps 1.6.0 2021-02-28 [1] CRAN (R 4.0.4) purrr * 0.3.4 2020-04-17 [1] CRAN (R 4.0.0) R6 2.5.0 2020-10-28 [1] CRAN (R 4.0.3) Rcpp 1.0.6 2021-01-15 [1] CRAN (R 4.0.3) recipes * 0.1.15 2020-11-11 [1] CRAN (R 4.0.3) remotes 2.3.0 2021-04-01 [1] CRAN (R 4.0.4) rlang 0.4.10 2020-12-30 [1] CRAN (R 4.0.3) rootSolve 1.8.2.1 2020-04-27 [1] CRAN (R 4.0.0) rpart 4.1-15 2019-04-12 [2] CRAN (R 4.0.4) rprojroot 2.0.2 2020-11-15 [1] CRAN (R 4.0.3) rsample * 0.0.9 2021-02-17 [1] CRAN (R 4.0.4) rstudioapi 0.13 2020-11-12 [1] CRAN (R 4.0.3) Rttf2pt1 1.3.8 2020-01-10 [1] CRAN (R 4.0.0) scales * 1.1.1 2020-05-11 [1] CRAN (R 4.0.0) sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 4.0.0) shape 1.4.5 2020-09-13 [1] CRAN (R 4.0.2) snakecase 0.11.0 2019-05-25 [1] CRAN (R 4.0.0) stringi 1.5.3 2020-09-09 [1] CRAN (R 4.0.2) stringr 1.4.0 2019-02-10 [1] CRAN (R 4.0.0) survival 3.2-7 2020-09-28 [2] CRAN (R 4.0.4) testthat 3.0.2 2021-02-14 [1] CRAN (R 4.0.3) tibble * 3.1.0 2021-02-25 [1] CRAN (R 4.0.4) tidymodels * 0.1.2 2020-11-22 [1] CRAN (R 4.0.3) tidyr * 1.1.3 2021-03-03 [1] CRAN (R 4.0.4) tidyselect 1.1.0 2020-05-11 [1] CRAN (R 4.0.0) timeDate 3043.102 2018-02-21 [1] CRAN (R 4.0.0) treesnip * 0.1.0.9000 2021-01-20 [1] Github (curso-r/treesnip@bf27cd8) tune * 0.1.3 2021-02-28 [1] CRAN (R 4.0.4) usethis 2.0.1 2021-02-10 [1] CRAN (R 4.0.3) utf8 1.2.1 2021-03-12 [1] CRAN (R 4.0.4) vctrs 0.3.7 2021-03-29 [1] CRAN (R 4.0.4) withr 2.4.1 2021-01-26 [1] CRAN (R 4.0.3) workflows * 0.2.2 2021-03-10 [1] CRAN (R 4.0.4) yaml 2.2.1 2020-02-01 [1] CRAN (R 4.0.0) yardstick * 0.0.8 2021-03-28 [1] CRAN (R 4.0.4)

maybe you need to update other dependecies. mine works okay except the categorical_features

It seems to be an issue of the current version of lightgbm on windows machines.
[R-package] FATAL Error when run train()
It should be fixed with the next ligthgbm release.