LightGbm seems to be way to loud in tidymodels/parsnip/treesnip
Steviey opened this issue · 3 comments
Steviey commented
LightGbm seems to be way to loud in tidymodels/treesnip/parsnip.
The native verbose-setting has multiple options....
dfalbel commented
Yeah, I have experimented disabling it as much as possible but it seems it's not completely possible to be fully disable it. If you have a reprex that shows the messages it would be great!
topepo commented
I had planned on using something like capture.output() but I suspect that the noise is coming from compiled code.
topepo commented
I think that negative verbose values do the job:
library(lightgbm)
#> Loading required package: R6
data(agaricus.train, package = "lightgbm")
train <- agaricus.train
dtrain <- lgb.Dataset(train$data, label = train$label)
data(agaricus.test, package = "lightgbm")
test <- agaricus.test
dtest <-
lgb.Dataset.create.valid(dtrain, test$data, label = test$label)
params <- list(
objective = "regression",
metric = "l2",
min_data = 1L,
learning_rate = 1.0
)
valids <- list(test = dtest)
model <- lgb.train(
params = params,
data = dtrain,
nrounds = 5L,
valids = valids,
early_stopping_rounds = 3L,
verbose = -1
)Created on 2022-02-27 by the reprex package (v2.0.1)
Session info
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#> setting value
#> version R version 4.1.2 (2021-11-01)
#> os macOS Catalina 10.15.7
#> system x86_64, darwin17.0
#> ui X11
#> language (EN)
#> collate en_US.UTF-8
#> ctype en_US.UTF-8
#> tz America/New_York
#> date 2022-02-27
#> pandoc 2.14.0.3 @ /Applications/RStudio.app/Contents/MacOS/pandoc/ (via rmarkdown)
#>
#> ─ Packages ───────────────────────────────────────────────────────────────────
#> package * version date (UTC) lib source
#> backports 1.4.1 2021-12-13 [1] CRAN (R 4.1.0)
#> cli 3.2.0 2022-02-14 [1] CRAN (R 4.1.2)
#> crayon 1.5.0 2022-02-14 [1] CRAN (R 4.1.2)
#> data.table 1.14.2 2021-09-27 [1] CRAN (R 4.1.0)
#> digest 0.6.29 2021-12-01 [1] CRAN (R 4.1.0)
#> ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.1.0)
#> evaluate 0.15 2022-02-18 [1] CRAN (R 4.1.2)
#> fansi 1.0.2 2022-01-14 [1] CRAN (R 4.1.2)
#> fastmap 1.1.0 2021-01-25 [1] CRAN (R 4.1.0)
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#> glue 1.6.2 2022-02-24 [1] CRAN (R 4.1.2)
#> highr 0.9 2021-04-16 [1] CRAN (R 4.1.0)
#> htmltools 0.5.2 2021-08-25 [1] CRAN (R 4.1.0)
#> jsonlite 1.8.0 2022-02-22 [1] CRAN (R 4.1.2)
#> knitr 1.37 2021-12-16 [1] CRAN (R 4.1.0)
#> lattice 0.20-45 2021-09-22 [1] CRAN (R 4.1.2)
#> lifecycle 1.0.1 2021-09-24 [1] CRAN (R 4.1.0)
#> lightgbm * 3.3.2 2022-01-14 [1] CRAN (R 4.1.2)
#> magrittr 2.0.2 2022-01-26 [1] CRAN (R 4.1.2)
#> Matrix 1.3-4 2021-06-01 [1] CRAN (R 4.1.2)
#> pillar 1.7.0.9000 2022-02-24 [1] Github (r-lib/pillar@ccb2449)
#> pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.1.0)
#> purrr 0.3.4 2020-04-17 [1] CRAN (R 4.1.0)
#> R.cache 0.15.0 2021-04-30 [1] CRAN (R 4.1.0)
#> R.methodsS3 1.8.1 2020-08-26 [1] CRAN (R 4.1.0)
#> R.oo 1.24.0 2020-08-26 [1] CRAN (R 4.1.0)
#> R.utils 2.11.0 2021-09-26 [1] CRAN (R 4.1.0)
#> R6 * 2.5.1 2021-08-19 [1] CRAN (R 4.1.0)
#> reprex 2.0.1 2021-08-05 [1] CRAN (R 4.1.0)
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#> rmarkdown 2.11 2021-09-14 [1] CRAN (R 4.1.0)
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#> sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.1.0)
#> stringi 1.7.6 2021-11-29 [1] CRAN (R 4.1.0)
#> stringr 1.4.0 2019-02-10 [1] CRAN (R 4.1.0)
#> styler 1.6.2 2021-09-23 [1] CRAN (R 4.1.0)
#> tibble 3.1.6 2021-11-07 [1] CRAN (R 4.1.0)
#> utf8 1.2.2 2021-07-24 [1] CRAN (R 4.1.0)
#> vctrs 0.3.8 2021-04-29 [1] CRAN (R 4.1.0)
#> withr 2.4.3 2021-11-30 [1] CRAN (R 4.1.0)
#> xfun 0.29 2021-12-14 [1] CRAN (R 4.1.0)
#> yaml 2.3.5 2022-02-21 [1] CRAN (R 4.1.2)
#>
#> [1] /Library/Frameworks/R.framework/Versions/4.1/Resources/library
#>
#> ──────────────────────────────────────────────────────────────────────────────