cyy25121

cyy25121's Stars

• samtools/tabix

  Note: tabix and bgzip binaries are now part of the HTSlib project.

  Language:C9140

• samtools/samtools

  Tools (written in C using htslib) for manipulating next-generation sequencing data

  Language:C1.6k580

• samtools/htslib

  C library for high-throughput sequencing data formats

  Language:C810447

• samtools/bcftools

  This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

  Language:C673240

• vcftools/vcftools

  A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.

  Language:C++500148

• nextstrain/ncov

  Nextstrain build for novel coronavirus SARS-CoV-2

  Language:Python1.4k403

• FDA/openfda

  openFDA is an FDA project to provide open APIs, raw data downloads, documentation and examples, and a developer community for an important collection of FDA public datasets.

  Language:Python574132

• bbc/react-transcript-editor

  A React component to make correcting automated transcriptions of audio and video easier and faster. By BBC News Labs. - Work in progress

  Language:JavaScript569164

• tseemann/PEAR

  Pair-End AssembeR

  Language:C2544

• pallets/click

  Python composable command line interface toolkit

  Language:Python15.7k1.4k

• marcelm/cutadapt

  Cutadapt removes adapter sequences from sequencing reads

  Language:Python522129

• leonardomso/33-js-concepts

  📜 33 JavaScript concepts every developer should know.

  Language:JavaScript63.7k8.9k

• FunctionLab/ExPecto

  predicting expression effects of human genome variants ab initio from sequence

  Language:Python11841

• qilin-editor/qilin-app

  Fully hackable text editor developed for exact sciences with built-in KaTeX and AsciiMath support. Extensible via plugins and themes. Exportable as HTML, PDF and GFM.

  Language:JavaScript43825

• wellsjo/JSON-Splora

  GUI app for editing, visualizing, and manipulating JSON data

  Language:JavaScript1.9k60

• broadinstitute/picard

  A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

  Language:Java980369

• pcottle/learnGitBranching

  An interactive git visualization and tutorial. Aspiring students of git can use this app to educate and challenge themselves towards mastery of git!

  Language:JavaScript30.6k5.8k

• wadhwasahil/Relation_Extraction

  Relation Extraction using Deep learning(CNN)

  Language:Python10052

• yahoo/TensorFlowOnSpark

  TensorFlowOnSpark brings TensorFlow programs to Apache Spark clusters.

  Language:Python3.9k939

• donnemartin/dev-setup

  macOS development environment setup: Easy-to-understand instructions with automated setup scripts for developer tools like Vim, Sublime Text, Bash, iTerm, Python data analysis, Spark, Hadoop MapReduce, AWS, Heroku, JavaScript web development, Android development, common data stores, and dev-based OS X defaults.

  Language:Python6.1k1.2k

• donnemartin/data-science-ipython-notebooks

  Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.

  Language:Python27.4k7.9k