Circos plot on tissue annotation for the Hope cohort
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mkoptyra commented
@komalsrathi UPDATED!
this is example how we stratified the clinical features in the former proteogenomic paper.
The following features are needed on the need in the Hope cohort circos plot:
- Gender - column E
- age.class - column F
- Diagnosis.Type_demoted - column G
- Sample.annotation - column H
- Tumor.Location.condensed - column I
Let me know if you know how to run circos plots - if not, no worries, let me know
mkoptyra commented
@komalsrathi this ^^ excel and the columns highlighted yellow:
Gender - column E
age.class - column F
Diagnosis.Type_demoted - column G
Sample.annotation - column H
Tumor.Location.condensed - column I