Pinned Repositories
biopkgs
Bioinformatics Nix packages collection
blat
BLAST-Like Alignment Tool
caela
Bioinformatic utilities written in R, Perl, Python, Shell, and C++.
genomic
Tools for genomic copy-number analysis.
mlgo
Machine learning algorithms in Go
mutopp
Categorizing mutations and enumerating mutation opportunities
nix-interpreter-ts
Nix interpreter in Typescript
pm2bib
Convert Pubmed ID to a BibTex entry
pyp
Pyed Piper: Python Power at the Prompt
stograd
Stochastic gradient descent library in C++
djhshih's Repositories
djhshih/biopkgs
Bioinformatics Nix packages collection
djhshih/setup-linux
djhshih/patefiant
Scripts for deploying local installations of select Linux programs
djhshih/cshkg
djhshih/djhshih.github.io
djhshih/genomic
Tools for genomic copy-number analysis.
djhshih/us-treasury-rates
djhshih/analysis-hcc-cd133-st
djhshih/dot
djhshih/seq-targets
djhshih/u133-array-to-tcga-rnaseq
djhshih/analysis-cmap
djhshih/analysis-egfrir
djhshih/analysis-lineage-tracing-b1a
djhshih/bioc-rnaseq
Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
djhshih/exercise-genomics
djhshih/exercise-python
djhshih/explained-variance
djhshih/gtex
djhshih/intro-hmm
djhshih/intro-transformer
djhshih/jart
Tools for managing jar files
djhshih/rt-benchmark
Code to test Rt estimates against synthetic data
djhshih/setup-project
djhshih/sf
Simple Features for R
djhshih/swl
djhshih/tutorial-code-organization
djhshih/tutorial-cpp
djhshih/tutorial-python
djhshih/xclone
Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.