Donaldson Lab
Official GitHub for The Donaldson Lab at University of Colorado Boulder
University of Colorado Boulder
Pinned Repositories
Cleversys_scripts
python scripts for parsing cleversys output
CleversysSummaryRearranger
To rearrange the summary file from Cleversys and put it in a usable format
Documents
A repo to house various documents used by the lab.
DonaldsonDLC
Using markerless pose estimation to quantify mating bouts.
Imaging-Paper
Code and data related the imaging paper, "A Neuronal Signature for Monogamous Reunion".
Lickometer
Initial Lickometer Upload
monogamousreunion
This repository houses the analytical code for the paper, "A neuronal signature for monogamous reunion".
Operant-Cage
PhAT
A flexible open-source GUI-driven toolkit for photometry analysis
separationRNAseq
Donaldson Lab's Repositories
donaldsonlab/PhAT
A flexible open-source GUI-driven toolkit for photometry analysis
donaldsonlab/DonaldsonDLC
Using markerless pose estimation to quantify mating bouts.
donaldsonlab/Lickometer
Initial Lickometer Upload
donaldsonlab/Operant-Cage
donaldsonlab/BlackWhiteCage
This chamber has an open-topped half painted white and an enclosed half painted black
donaldsonlab/Cleversys_scripts
python scripts for parsing cleversys output
donaldsonlab/CleversysSummaryRearranger
To rearrange the summary file from Cleversys and put it in a usable format
donaldsonlab/Documents
A repo to house various documents used by the lab.
donaldsonlab/fiberphotometry
donaldsonlab/Home_Cage
Project Development for the Home Cage Experiment and Environment
donaldsonlab/Imaging-Paper
Code and data related the imaging paper, "A Neuronal Signature for Monogamous Reunion".
donaldsonlab/makenzie_operant
donaldsonlab/monogamousreunion
This repository houses the analytical code for the paper, "A neuronal signature for monogamous reunion".
donaldsonlab/Npm-Analysis-inprogress
Where we will publish the fiber pho analysis
donaldsonlab/separationRNAseq
donaldsonlab/Tilt_Cage
Development for the tilting choice chamber
donaldsonlab/UI-lab-capture
An interface designed to make the scientists job easier by providing a simple, yet effective way of setting up their cameras and starting their data collection.
donaldsonlab/vole_surgery_registry
donaldsonlab/DLC_Helper
Designed to making setting up a markerless pose estimation of user-defined features with deep learning for all animals, including humans
donaldsonlab/Pierce2023_Currentbiology
donaldsonlab/PPT-Chamber
Files to fabricate Partner Preference Test chambers
donaldsonlab/RampCage
Development for the Ramp Cage with a wheel, IR beam break, and servo brake