Pinned Repositories
AAO_DRAFT
draft arthropod antomy ontology
ABC_2_CAS
Mapping ABC atlas schema to Cell Annotation Schema
abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
aism
An Insect Anatomy Ontology
allen-cell-experiments
Aya_study_tracker
bbop-graph-noctua
A subclass of bbop-graph that layers on a complete annotation and graph editing model for the Noctua set of tools.
brainscowl
Easy, text-based interaction with the OWL-API using SCOWL + methods inspired by Brain.
cell_annotation_standard
drosophila-anatomy-ontology-test
Testing a new, more standard REPO structure for the DAO. FOR TESTING ONLY - THIS IS NOT AN OFFICIAL DAO/FBBT SITE!
dosumis's Repositories
dosumis/ABC_2_CAS
Mapping ABC atlas schema to Cell Annotation Schema
dosumis/abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
dosumis/aism
An Insect Anatomy Ontology
dosumis/brainscowl
Easy, text-based interaction with the OWL-API using SCOWL + methods inspired by Brain.
dosumis/cell_annotation_standard
dosumis/CellphoneDB
CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
dosumis/cryoem
CRYOEM ontology repository
dosumis/siletti_hacking
dosumis/CxG_test
OBASK CxG Pandasaurus test
dosumis/flybase-ontology-scripts
Scripts for working with FlyBase ontologies, uses include bulk ontology edits and report generation.
dosumis/navis
Python 3 library for Neuron Analysis and Visualization
dosumis/nhp_basal_ganglia_demo
dosumis/obo-patterns.github.io
dosumis/OBOFoundry.github.io
dosumis/obook
OBO Organized Knowledge: Training materials for becoming an OBO engineer
dosumis/ontology-metadata
New repo to decouple work on metadata from IAO release cycle
dosumis/pandas_scratch
dosumis/Pheno_odk_test
A test repo demonstrating design pattern -based phenotype ontology development using the Ontology Development Kit
dosumis/prototypes
repository for building and sharing small prototype ontologies
dosumis/purl.obolibrary.org
A new system for managing OBO PURLs
dosumis/sbt_assembly_scowl_test
Testing migration sbt assembly + scowl to newer versions
dosumis/scrattch.taxonomy
Allen Institute Taxonomy building R package
dosumis/semwebdevtest
recruitment test
dosumis/single-cell-curation
Code and documentation for the curation of cellxgene datasets
dosumis/souffle_test
dosumis/super_simple_GH_test
dosumis/super_simple_test
Just for testing
dosumis/tsv2pdm
A simple Python module for generating and processing python data structures from tsv files.
dosumis/uPheno_ODK_test
Testing the new version of ODK with uPheno patterns
dosumis/vfb-curation-demo
dont use