Pinned Repositories
VarDictJava
VarDict Java port
picard
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
cromwell-monitor
Generate stats for Cromwell task calls including resource utilization & estimated costs
pyinstaller
Freeze (package) Python programs into stand-alone executables
cloud-pipeline
Cloud agnostic genomics analysis, scientific computation and storage platform
fonda
Fonda is a framework which offers scalable and automatic analysis of multiple NGS sequencing data types
NGB
New Genome Browser (NGB) - a Web - based NGS data viewer with unique Structural Variations (SVs) visualization capabilities, high performance, scalability, and cloud data support
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
ekazachkova's Repositories
ekazachkova/cromwell-monitor
Generate stats for Cromwell task calls including resource utilization & estimated costs
ekazachkova/pyinstaller
Freeze (package) Python programs into stand-alone executables