Choose splitting dimensions
Closed this issue · 2 comments
Hi
It would be practical to be able to choose which dimensions nd2tool splits images upon, for instance specifying "positions" but not "channels" to get individual multi-plane, multi-channel images in a memory-efficient way.
Thanks!
Q
In version 0.1.3 I've added the command line option --composite which will create a composite image per field of view, i.e. will not split over color.
It remains to select color maps automatically or to have some clever default options. As it is no color maps are set, in that case ImageJ automagically display the channels with different colors. Let me know if this is what you wanted and how we can make it more useful.
Closing this for now. Please submit a new issue for the option to choose colors.