emilymak

Pinned Repositories

• DeepAb

  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.

  Language:Python00

• engineered-riboregulator-ML

  Sequence-to-function deep learning frameworks for engineered riboregulators

  Language:Jupyter Notebook00

• EQL

  Equation Learner, a neural network approach to symbolic regression

  Language:Jupyter Notebook00

• EQL_Tensorflow

  Tensorflow implementation of equation learner

  Language:Jupyter Notebook00

• esm

  Evolutionary Scale Modeling (esm): Pretrained language models for proteins

  Language:Jupyter Notebook00

• grp_paper

  Code and data used in The Great Repertoire Project

  Language:Jupyter Notebook00

• jax-unirep

  Reimplementation of the UniRep protein featurization model.

  Language:TeX00

• pyCircos

  python Circos

  Language:Jupyter Notebook00

• SARS-CoV-2-RBD_DMS

  Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike

  Language:Jupyter Notebook00

• shap

  A game theoretic approach to explain the output of any machine learning model.

  Language:Jupyter Notebook00

emilymak's Repositories