endrebak
PhD candidate emeritus. Bioinformatics/blockchain/graphics/web. Low-level + functional programming. Please open issues or ask questions in public forums.
NTNUSan Junipero
Pinned Repositories
epic2
Ultraperformant reimplementation of SICER
fastindep
(Maintenance fork) Find the largest independent set of genetically unrelated samples
kg
Query kegg from the command line
ldetect
poranges
pyranges/bioframe for polars
ncls
The Nested Containment List for Python. Basically a static interval-tree that is silly fast for both construction and lookups.
pyranges
Performant Pythonic GenomicRanges
pyranges_1.x
PyRanges as a DataFrame subclass.
pyrle
Numerical Run Length Encoding and Arithmetic in Cython
methplotlib
Plotting tools for nanopore methylation data
endrebak's Repositories
endrebak/poranges
pyranges/bioframe for polars
endrebak/.doom.d
doom emacs config
endrebak/bioconda-recipes
Conda recipes for the bioconda channel.
endrebak/bioframe
Pandas utilities for tab-delimited and other genomic data files
endrebak/cardano-documentation
endrebak/demo
A demo repository for My JSON Server (Alpha)
endrebak/ecseq
SPA for ecseq database
endrebak/everclear-alpha
endrebak/everclear-old
endrebak/gad2
DAG system
endrebak/interval_frame
Extending polars with interval operations
endrebak/karabiner_settings
My ergonomic keyboard config
endrebak/ldivide
Simple and inclusive detection of independent linkage disequilibrium blocks
endrebak/Learning-Bitcoin-from-the-Command-Line
A complete course for learning Bitcoin programming and usage from the command
endrebak/online-cv
A minimal Jekyll Theme to host your resume (CV)
endrebak/ouija
Specter live demo
endrebak/pyranges-rtd
Testing setting up read the docs with pyranges
endrebak/pyranges_book
Old pyranges docs
endrebak/re-make
endrebak/reagent-pdfjs
endrebak/shadow-sente
nah
endrebak/test-gh-actions
testing
endrebak/testing-clojurescript
endrebak/tickets
NFT Tickets
endrebak/triform
triform2
endrebak/VulkanPlay
Testing Vulkan macOS
endrebak/chisel-template
endrebak/goku
Goku keymaps
endrebak/neovim-config
Neovim settings
endrebak/pyranges_plot
Gene visualization package for PyRanges generated dataframe objects.