the new reference release by 10x

Question

Closed this issue a month ago · 2 comments

Hi, I'm wondering have you tested the new reference release by 10x. "https://cf.10xgenomics.com/supp/cell-exp/refdata-gex-GRCh38-2024-A.tar.gz" Thanks! Hsiao-Lin

Answer 1 · 2024-06-27T07:49:56.000Z

I wasn't aware there was a new release. Thanks for letting us know, I will try it out.

Thanks,

Neil

Answer 2 · 2024-06-27T13:37:56.000Z

Thanks Neil! Also it's using the GRCh38.p14 not GRCh38.p13, but I think the genomic location/coordinate doesn't change. Human GRCh38 (GENCODE v44/Ensembl110 annotations). Here is the link to the release note: https://www.10xgenomics.com/support/software/cell-ranger/latest/release-notes/cr-reference-release-notes. Thanks again!