Pinned Repositories
baorista
R package for Bayesian and Frequentist Aoristic inference
bayesian_spd
Data and R scripts for the manuscript 'A Bayesian approach for fitting and comparing demographic growth models of radiocarbon dates: a case study on the Jomon-Yayoi transition in Kyushu, Japan'
cTransmission
An Approximate Bayesian Computation Framework for inferring patterns of cultural transmission from frequency data
CulturalTransmissionModel
Source codes for the paper "The effect of equilibrium assumptions on reconstructing patterns of cultural transmission from frequency data"
diffusionCurve
Data and R scripts for the paper 'Modelling Diffusion of Innovation Curves using Radiocarbon Data'
HERAChp.KandlerCrema
This package contains a set of R functions that enables the reproduction of the analysis and associated figures for the book chapter Analysing cultural frequency data: neutral theory by Anne Kandler and Enrico Crema for the volume Handbook of Evolutionary Research in Archaeology, edited by Anna Prentiss. The package contains two main functions for simulating cultural transmission:
jomonPhasesAndPopulation
Data and R scripts for the manuscript "A multi-proxy inference of Jōmon population dynamics using Bayesian phase models, residential data, and summed probability distribution of 14C dates"
NeolithicKoreaDemography
Contains R Scripts and Data associated to the paper "Bayesian analyses question the role of climate in Chulmun demography" by Kim et. al
nimbleCarbon
Models and Utility Functions for Bayesian Analyses of Radiocarbon Dates with NIMBLE
yayoi_rice_dispersal
Modelling Dispersal of Rice in Prehistoric Japan
ercrema's Repositories
ercrema/CulturalTransmissionModel
Source codes for the paper "The effect of equilibrium assumptions on reconstructing patterns of cultural transmission from frequency data"
ercrema/HERAChp.KandlerCrema
This package contains a set of R functions that enables the reproduction of the analysis and associated figures for the book chapter Analysing cultural frequency data: neutral theory by Anne Kandler and Enrico Crema for the volume Handbook of Evolutionary Research in Archaeology, edited by Anna Prentiss. The package contains two main functions for simulating cultural transmission:
ercrema/JAS2017_spatialSPD
Scripts for reproducing analysis and figures on the paper "Spatio-temporal approaches to archaeological radiocarbon dates"
ercrema/binford
Datasets used in Binford's 2001 book "Constructing Frames of Reference: An Analytical Method for Archaeological Theory Building Using Ethnographic and Environmental Data Sets"
ercrema/CourseComparativeMethods
Examples of application of comparative methods in R
ercrema/AHMnimble
Examples from Kéry & Royle's "Applied Hierarchical Modeling in Ecology (Volume I)" converted to NIMBLE
ercrema/archSeries
Frequency time-series tools for archaeology
ercrema/bookchapter_culturalevolution_2019
Scripts and Code to accompany book chapter in the upcoming Handbook of Evolutionary Research in Archaeology edited by A.Prentiss
ercrema/Jomon_SPD_Comparison
Source Codes, Scripts, and Data for the paper "Summed Probability Distribution of 14C Dates suggest divergence in the population dynamics of Central and Northern Japan during the Jomon Period"
ercrema/Risk-Resilience_QSR2017
Data files and R script for analyses used in paper "Risk and Resilience in the Late Glacial: a Case Study from the Western Mediterranean" (Barton et al 2017), published in Quaternary Science Reviews
ercrema/tutorials
ercrema/VIM-R-IDE-Vim_Config
:heart: A perfect R integration with vim :heart:
ercrema/bayesian_notes
ercrema/Bchron
A Bayesian radiocarbon chronology model with R
ercrema/c14bazAAR
R Package - Download and Prepare C14 Dates from Different Source Databases
ercrema/crosstalk-demo
ercrema/cultEvoTools
ercrema/cultural-boundaries
ercrema/distribution_diagrams
R-script for generating canonical diagrams of distributions to be used to describe Bayesian hierarchical models.
ercrema/FastMarching
Source Codes for the Modified Fast Marching Method explained in the paper "Modelling boundaries between converging fronts in prehistory" by Silva, F., and Steele, J.
ercrema/iprior
An R package for I-prior regression
ercrema/knitr
A general-purpose tool for dynamic report generation in R
ercrema/magrittr
Improve the readability of R code with the pipe
ercrema/NZ_Population
Development of summed probability distributions of radiocarbon dates
ercrema/oxcAAR
R package - Interaction with Oxcal
ercrema/paleocar
Paleoclimate Reconstruction from Tree Rings using Correlation Adjusted corRelation
ercrema/photon
:dart: R Interface to the Photon API / Interface entre R et l'API de photon
ercrema/prioritizr
Systematic conservation prioritization in R
ercrema/signatselect
signatselect: Identifying signatures of selection
ercrema/vim-colors-japanesque
The colorscheme featuring Japanese traditional colors.