Pinned Repositories
CryoEM-Joint-Refinement
Joint angular refinement and reconstruction algorithm for single-particle Cryo-EM.
GlobalBioIm
A unifying Matlab framework for the development of reconstruction algorithms (solving inverse problems) in computational imaging
FlexSIM
A flexible SIM reconstruction method capable to handle difficult data prone to reconstruction artifacts.
GlobalBioIm
A unifying Matlab framework for the development of reconstruction algorithms in computational imaging
MA-TIRF_Reconstruction
Multi-angle total internal reflection fluorescence microscopy (MA-TIRF) reconstruction algorithm which jointly performs volume reconstruction, deconvolution, and background estimation.
OptiTools
SIM_Reconstruction
Single-slice structured illumination microscopy (SIM) reconstruction algorithm based on an inner-loop-free ADMM. This method enables the estimation of the out-of-focus signal that usually affects the reconstructions obtained from 2D acquisitions.
SMLM-CEL0
Single Molecule Localization Microscopy (SMLM) algorithm. It is a grid-based method which minimizes the Continuous Exact L0 functional through the Iterative Reweighted L1 algorithm
VMLMB
VMLMB algorithm for Python, Matlab, GNU Octave, and Yorick
Lippmann-Schwinger
Matlab code for optical diffraction tomography in 2D and 3D using Lippmann-Schwinger model
esoubies's Repositories
esoubies/SIM_Reconstruction
Single-slice structured illumination microscopy (SIM) reconstruction algorithm based on an inner-loop-free ADMM. This method enables the estimation of the out-of-focus signal that usually affects the reconstructions obtained from 2D acquisitions.
esoubies/FlexSIM
A flexible SIM reconstruction method capable to handle difficult data prone to reconstruction artifacts.
esoubies/SMLM-CEL0
Single Molecule Localization Microscopy (SMLM) algorithm. It is a grid-based method which minimizes the Continuous Exact L0 functional through the Iterative Reweighted L1 algorithm
esoubies/OptiTools
esoubies/GlobalBioIm
A unifying Matlab framework for the development of reconstruction algorithms in computational imaging
esoubies/MA-TIRF_Reconstruction
Multi-angle total internal reflection fluorescence microscopy (MA-TIRF) reconstruction algorithm which jointly performs volume reconstruction, deconvolution, and background estimation.
esoubies/VMLMB
VMLMB algorithm for Python, Matlab, GNU Octave, and Yorick