eturkes
PhD student studying neurodegenerative diseases at the Duff Lab at UCL DRI
@duff-lab-team, UK DRI at UCLLondon, UK
Pinned Repositories
acosta-organoid-scRNAseq
Analysis of organoid lines modeling FTD with Alzheimer's-like phenotype
AD-exosome-characterisation
Analysis of exosomes in Alzheimer's Disease
autossh-autosetup
Script for setting up reverse AutoSSH
bag3-co-ip
Analysis of BAG3 Co-IP MS data
bag3-pathway-analysis
Pathway analysis of the BAG3 protein
chen-2020-ST
Analysis of Spatial Transcriptomics data from Chen et al 2020
habib-2017-snRNAseq
Analysis of Habib 2017 snRNAseq
lake-2016-snRNAseq
Analysis of Lake 2016 snRNAseq
resume
My resume, built using the Awesome CV LaTeX template
website-eturkes-hugo
My personal website built using the Hugo static site generator and Wowchemy Academic theme
eturkes's Repositories
eturkes/habib-2017-snRNAseq
Analysis of Habib 2017 snRNAseq
eturkes/lake-2016-snRNAseq
Analysis of Lake 2016 snRNAseq
eturkes/autossh-autosetup
Script for setting up reverse AutoSSH
eturkes/bag3-co-ip
Analysis of BAG3 Co-IP MS data
eturkes/bag3-pathway-analysis
Pathway analysis of the BAG3 protein
eturkes/iss
Code for analysis of in situ sequencing
eturkes/iss-microglia
Repo for in-situ sequencing (ISS) analysis of microglia
eturkes/KeepToText
Convert a Google Takeout zip file containing Google Keep notes to a directory of text files, suitable for import into systems such as Evernote
eturkes/oxtr-ko-201703
Master thesis data on oxytocin receptor knockout mice
eturkes/pivot-docker
Community-developed Docker container for the PIVOT transcriptomics platform
eturkes/pymice-analyzer
A PyMICE project creator and pipeline manipulator
eturkes/pymice-modules
Repository for PyMICE Intellicage paradigms, statistical methods, and display methods
eturkes/pymice-notebook
Docker Jupyter Notebook for PyMICE Intellicage analysis
eturkes/pymice-server
A web UI for server-based Intellicage analysis using PyMICE
eturkes/pymice-tools
A meta repository for PyMICE submodules. This is the PyPI/Conda installable.
eturkes/R-docker-minimal
Docker image with a minimal configuration and packages
eturkes/R-template
A template for starting R projects
eturkes/R-tutorial
A simple tutorial for navigating R
eturkes/RNAseq-preprocess
Repository for general preprocessing of RNAseq data
eturkes/snippets
Random pieces of code
eturkes/taub-beamer-template
A beamer template for the CUMC Taub Institute, adapted from http://www.rax.cl/other-stuff
eturkes/transcriptomics-benchmarks
A benchmarking of the many tools in the transcriptomics ecosystem
eturkes/utils
Simply a publicly available reference to utils files that may be referenced by code in private repos
eturkes/website-eturkes
My personal website, adapted from Divio's django CMS