Missing esm.utils.structure.metrics in v3.0.7
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gohdavid commented
Hi! I'm getting an error from a fresh install with the v3.0.7 release. esm.utils.structure.metrics
seems to be missing from the repo.
❯ python (test)
Python 3.10.15 | packaged by conda-forge | (main, Oct 16 2024, 01:24:20) [Clang 17.0.6 ] on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> from esm.models.esm3 import ESM3
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/Users/wudw/micromamba/envs/test/lib/python3.10/site-packages/esm/models/esm3.py", line 20, in <module>
from esm.sdk.api import (
File "/Users/wudw/micromamba/envs/test/lib/python3.10/site-packages/esm/sdk/__init__.py", line 3, in <module>
from esm.sdk.forge import ESM3ForgeInferenceClient
File "/Users/wudw/micromamba/envs/test/lib/python3.10/site-packages/esm/sdk/forge.py", line 15, in <module>
from esm.sdk.api import (
File "/Users/wudw/micromamba/envs/test/lib/python3.10/site-packages/esm/sdk/api.py", line 15, in <module>
from esm.utils import encoding
File "/Users/wudw/micromamba/envs/test/lib/python3.10/site-packages/esm/utils/encoding.py", line 30, in <module>
from esm.utils.structure.protein_chain import ProteinChain
File "/Users/wudw/micromamba/envs/test/lib/python3.10/site-packages/esm/utils/structure/protein_chain.py", line 29, in <module>
from esm.utils.structure.metrics import compute_lddt_ca
ModuleNotFoundError: No module named 'esm.utils.structure.metrics'
❯ pip list | grep esm (test)
esm 3.0.7