Pinned Repositories
awesome-github-profile-readme-templates
This repository contains best profile readme's for your reference.
coursework
Selected courses in mathematics, statistics and data science I found particularly useful and well-structured.
D-BSSE-SysBio-course
Scripts and presentation as introduction to R for the Systems Biology course, HS 2013, D-BSSE, ETH Zurich
dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow
dupiR
An R package for absolute quantification under uncertainty. dupiR implements a Bayesian approach using a binomial likelihood and non-conjugate, discrete uniform priors under sampling with or without replacement.
FedericoComoglio
Personal repo to add README.md to GitHub profile
meme2R
A parser from MEME XML output to R
Rknots
An R package for the topological analysis of knotted 3D structures (with a focus on biological polymers)
wavClusteR
An R/BioC package implementing a statistical and computational framework for the identification of RNA-protein interaction sites in PAR-CLIP data.
DNAshapeR
R package for high-throughput DNA shape predictions and feature encoding
FedericoComoglio's Repositories
FedericoComoglio/wavClusteR
An R/BioC package implementing a statistical and computational framework for the identification of RNA-protein interaction sites in PAR-CLIP data.
FedericoComoglio/meme2R
A parser from MEME XML output to R
FedericoComoglio/Rknots
An R package for the topological analysis of knotted 3D structures (with a focus on biological polymers)
FedericoComoglio/coursework
Selected courses in mathematics, statistics and data science I found particularly useful and well-structured.
FedericoComoglio/dupiR
An R package for absolute quantification under uncertainty. dupiR implements a Bayesian approach using a binomial likelihood and non-conjugate, discrete uniform priors under sampling with or without replacement.
FedericoComoglio/awesome-github-profile-readme-templates
This repository contains best profile readme's for your reference.
FedericoComoglio/D-BSSE-SysBio-course
Scripts and presentation as introduction to R for the Systems Biology course, HS 2013, D-BSSE, ETH Zurich
FedericoComoglio/dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow
FedericoComoglio/FedericoComoglio
Personal repo to add README.md to GitHub profile
FedericoComoglio/rSymPy
R Interface to SymPy Computer Algebra System
FedericoComoglio/federicocomoglio.github.io
Personal website
FedericoComoglio/Promoters_in_LADs
Code used in Leemans et al 2019: "Promoter-intrinsic and local chromatin features determine gene repression in LADs"
FedericoComoglio/transfer-learning-cnn
Transfer learning with pre-trained deep CNNs to predict cell mechanisms of action in response to drug perturbations. See Kensert et al. 2018 biorXiv