Residual grouping according to RE groups that are used in the model
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florianhartig commented
Due to a question via email, I wondered if it is a problem to group residuals according to groups that also used as REs in the model.
Based on a quick simulation, I didn't see any problems with that.
library(DHARMa)
library(lme4)
testData = createData(sampleSize = 5000,numGroups = 1000, randomEffectVariance = 2)
fittedModel <- glmer(observedResponse ~ Environment1 + (1|group), family = "poisson", data = testData)
simulationOutput <- simulateResiduals(fittedModel = fittedModel, plot = F)
simulationOutput = recalculateResiduals(simulationOutput , group = testData$group)
plot(simulationOutput)
I would like to check further because I had suspected that there could be issues similar to #43