futak

futak's Stars

• lh3/biofast

  Benchmarking programming languages/implementations for common tasks in Bioinformatics

  Language:C17926

• tayllan/awesome-algorithms

  A curated list of awesome places to learn and/or practice algorithms.

  21k2.7k

• practical-tutorials/project-based-learning

  Curated list of project-based tutorials

  206k26.9k

• zhiwehu/Python-programming-exercises

  100+ Python challenging programming exercises

  27k6.8k

• datasciencemasters/go

  The Open Source Data Science Masters

  25.1k6.2k

• ANHIG/IMGTHLA

  Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute

  Language:Parrot20661

• DKMS/Hapl-o-Mat

  A software for haplotype inference

  Language:C++128

• Zuliz/inferenceHaplotypesEM

  Language:C1

• kylec/em_haplotype

  estimation-maximization for multilocus / multi-allelic haplotypes

  Language:R1

• axlmart/HaplotypeEM

  615 project : Haplotype estimation

  Language:C++22

• nf-core/hlatyping

  Precision HLA typing from next-generation sequencing data

  Language:Nextflow6330

• nmdp-bioinformatics/act-service

  Allele Calling Tool (ACT)

  Language:Python55

• Kingsford-Group/kourami

  Kourami: Graph-guided assembly for HLA alleles

  Language:Java3512

• humanlongevity/HLA

  xHLA: Fast and accurate HLA typing from short read sequence data

  Language:Jupyter Notebook10552

• nmdp-bioinformatics/gfe-db

  Graph database representing IPD-IMGT/HLA sequence data as GFE

  Language:Makefile1015

• HugoMananet/HLAminer

  HLAminer environment containerized for singularity

  Language:Shell21

• NCBI-Hackathons/HLAClustRView

  R package specialized in HLA typing clustering and visualization based on specific similarity metrics

  Language:R1210