The argument names for response functions are getting silly...
Closed this issue · 2 comments
At the moment we have arg1
and arg2
for parameter arg
along gradients 1 and 2 respectively. This is just not user friendly!
Instead, rewrite the response distribution functions Beta()
and Gaussian()
so that they have definition:
function(x, y = NULL, px, py = NULL)
where x
and y
are the first and second gradients respectively and px
and py
are each a list containing parameters for species on the first or second gradients. In the case of Gaussian()
we would have names
opt
tol
h
and for Beta()
we'd have names
A0
(orA
- haven't quite decided how closely to follow notation in Minchin (1987) )m
r
alpha
gamma
This way the parameters map to arguments without needing to have an indicator as to which gradient each pertains in the name.
Commit 3992a6c does the hard work of implementing this although things fail nastily in some cases if the parameter lists are not supplied with correct names. By nastily I mean the function runs but you get NA
s, sometimes silently. Bad!
Hence before I close this out checks on argument names in Gaussian()
and Beta()
are needed.